Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan04g1007 ATGTCTTTAAGTATCAAATATATGTGCCTGAATTCTGATAGGATTTCCCCTGTAAGGGTATTGCTTGATTTTTATTTTTATTTTTTTGTTAAAGGCTCAACCTTGAACTACTTTCTTGATGACAAGATTAATAAAGCTGAGATCCTTTTCCCTGGTGTTGCTTGCTTTGTGATTGCGGTCTGTCTTGGCTCTGCTGTTCACTTGTCCAACACGGCTGACAACAAAGCAAAGCTAGAAAGTTTATCTGCCGATTCCATGAAAGAGTTAAAGCCAATTGATGTCTCTGGATTCCCTAGTAGGGTTGAATCAAAGGACCTGGAGAATGCCGATGGTTCTTCACAAAAGGCAGAGGCTGGGACTGCAGACTTTCTTGTTCAGCTTGAAAACAGAAGATCCATCAAGGTGTTTGGTAAGGGCACACTGATTGGACTGTGCATAACTTTCTTTGCCGGTGTTTCCCTTTCTCTCTTCTCACCTGCATTCAATTTGGCCACAAACGATCAATGGAACACTCTGAACAAAGGCGTCCCACACTTGTCTGTCTATACTGCATTTTTCTACTTCTCGACCTCTTTTTTTGTCTTAGCCGTCATTCTCAATGTCATTTTCCTTTACCGTCCTGTACTTGACTTACCAAAAACAACATTCAAAGCATATCTGAATGACTGGAATGGTAGAGGATGGGCCTTCTTGGCTGGATTTTTGTGTGGGTTTGGCAATGGTCTGCAGTTCATGGGCGGCCAAGCTGCTGGATATGCAGCAGCAGATTCTGTGCAGGCATTTCCACTCATCAGCACATTTTGGGGAGTTGTTCTGTTTGGAGAATACCGTCGATCGTCGAGGAGAACGTACGTGTTGCTTGTCTGCATGTTGTTTATGTTTACAGTGGCTGTAGGGGTCCTAATGGCTTCATCAGGACATCGGAAACCTTCGAACTAG 939 43.34 MSLSIKYMCLNSDRISPVRVLLDFYFYFFVKGSTLNYFLDDKINKAEILFPGVACFVIAVCLGSAVHLSNTADNKAKLESLSADSMKELKPIDVSGFPSRVESKDLENADGSSQKAEAGTADFLVQLENRRSIKVFGKGTLIGLCITFFAGVSLSLFSPAFNLATNDQWNTLNKGVPHLSVYTAFFYFSTSFFVLAVILNVIFLYRPVLDLPKTTFKAYLNDWNGRGWAFLAGFLCGFGNGLQFMGGQAAGYAAADSVQAFPLISTFWGVVLFGEYRRSSRRTYVLLVCMLFMFTVAVGVLMASSGHRKPSN 312
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 8987347 8991309 - Tan0004084.5 Tan04g1007 749411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan04g1007 312 Pfam Ureide permease 30 304 IPR009834 GO:0016020(InterPro)|GO:0071705(InterPro)
Tan04g1007 312 PANTHER UREIDE PERMEASE 1-RELATED-RELATED 30 309 IPR030189 GO:0005274(PANTHER)|GO:0015505(PANTHER)|GO:0016020(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)|GO:0071705(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan04g1007 Tan-Chr4:8987347 Tan06g1253 Tan-Chr6:14060629 2.00E-126 dispersed
Tan04g1006 Tan-Chr4:8987347 Tan04g1007 Tan-Chr4:8987347 6.30E-160 tandem
Tan04g1007 Tan-Chr4:8987347 Tan04g1008 Tan-Chr4:8987347 1.70E-128 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan04g1007 - - - 0.0