Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tan04g1010 | ATGGCGGCTTTCGTGTTCTTAGTGTTTTTCCTTGCCCTAACTGGTCAATCTTATGCCAACTATTGCTTGTGTAGAGATGGAGTGAGCCAACAAGCTCTTCAAAAGGCACTGGATTATGCCTGTGGAGCTGGAGCTGACTGTTCTCCGATCCTCTCCAATGGCGCCTGTTTTCAGCCCAACACTGTCAAAGATCACTGCAATTACGCCGTCAACAGTTATTTCCAGCGTAAGGGACAAACCCAAGGAAGCTGTGACTTCTCCGGCGCCGCCACTCCCAGCGTTACCCTCACCGCCTGTAAGCCGGAACTTCCCTCGAAATTACCCTTTTGCCCCTCTTTACACCATTCTATTTCTCCGACTTCATCTTCTTCCTTGTGGGTTTTTTTGTTTTTTTTTCAGCTGTGCCCTCTGGTTGTGTCTATCCTTCTAGCCCCAGCAATGCTGGAACCTCGCCGTCGAACTCCGGCGGAACCACGCCGACGATGA | 486 | 50.62 | MAAFVFLVFFLALTGQSYANYCLCRDGVSQQALQKALDYACGAGADCSPILSNGACFQPNTVKDHCNYAVNSYFQRKGQTQGSCDFSGAATPSVTLTACKPELPSKLPFCPSLHHSISPTSSSSLWVFLFFFQLCPLVVSILLAPAMLEPRRRTPAEPRRR | 161 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 4 | 9001238 | 9003018 | - | Tan0000371.2 | Tan04g1010 | 749414 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tan04g1010 | 161 | Gene3D | - | 16 | 122 | - | - | |
| Tan04g1010 | 161 | SMART | X8_cls | 20 | 101 | IPR012946 | - | |
| Tan04g1010 | 161 | PANTHER | BETA-1,3 GLUCANASE | 8 | 97 | IPR044788 | - | |
| Tan04g1010 | 161 | Pfam | X8 domain | 21 | 91 | IPR012946 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Tan04g1010 | Tan-Chr4:9001238 | Tan05g2368 | Tan-Chr5:75021040 | 2.90E-31 | dispersed | |
| Tan04g1009 | Tan-Chr4:9001238 | Tan04g1010 | Tan-Chr4:9001238 | 1.20E-52 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tan04g1010 | - | - | - | 0.0 |