Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan04g1011 ATGGCTTCGATGACAAATGTAATTCAGTACCCAATTTGTACACATCGGTTACCTTCCCTGCGATTGCCTCCGAATAGAACAGTTCCCGCCAATTCTGTTGCTCTCGGATGTCGATCACTTGCTTCCAAAGCTTTGAACTCGCCGTTTTCACTGTTGACGGAGAACCGAACTGTTTCGCCGTCGGGGGAACTATCTAGCAAGGCTATTGGGCTCTTAAGCTCTAGACAACCTTTAACGTTTCGAAGTGTTGTTCGTCGGCCGGTGGTGAGGGCGACTGCCGCTGATGCCGACGGAGCTTCCGATGGGTTGACTAGCCCTTCGAAGAGCTTTGCTGCAAGATTTCCAGCACTCATTACTGGTTTCTACTTCTTTATGTGGTACTTCTTAAATGTTATTTTCAACATACTCAACAAAAAAGTCTACAATTATTTCCCATATCCATACTTTGTCTCTGTCATACATCTTCTGGTTGGAGTTGGATATTGTCTCATTTCTTGGGCTGTAGGTCTGCCAAAACGTACTCCGATAGATAAGGAGCTCTTGCTATTATTGACTCCAATTTCGCTATGTCATGCACTTGGACATGTGATGTCGAATGTTTCATTTGCAGCTGTCGCGGTGTCCTTCACTCACACCATTAAAGCTCTGGAGCCATTCTTTAACGCTGCTGCTTCTCAATTTGTTCTGGGACATCAAATTCCCTTCAGCTTGTGGCTTTCTCTAGCACCTGTTGTTTTAGGTGTGTCAATGGCATCACTAACGGAACTTTCCTTCAACTGGACTGGCTTTGTTAGTGCAATGATTTCAAACATTGCATTTACCTACAGAAGTATCTATTCGAAGAAGGCAATGACCGGAATGGACAGTACGAACGTGTATGCATACACCTCCATAATTGCTCTGTTGTTTTGCATTCCTCCTGCAGTAATGATTGAGGGACCGCAGTTGCTGCAGCATGGTTTTAAGGATGCCATTGCCAAAGTGGGTCTTCAAAAGTTCCTATCTGATCTTTTTTGGATCGGCATGTTTTATCATCTATACAATCAGCTTGCCACTAATACTCTTGAACGTGTTGCACCATTAACACATGCTGTAGGAAACGTATTGAAGCGAGTTTTTGTGATTGGGTTCTCCATTGTTGTCTTTGGCAATAAGATTTCAACTCAAACTGGAATCGGTACTGCTATAGCAATTGCCGGTGTCGCCATCTACTCCTTCATTAAAGCAAACTTGGAGGAGCAAAAACGGAGGGCTGCTAAAATTCCAGCCTCATAG 1275 44.0 MASMTNVIQYPICTHRLPSLRLPPNRTVPANSVALGCRSLASKALNSPFSLLTENRTVSPSGELSSKAIGLLSSRQPLTFRSVVRRPVVRATAADADGASDGLTSPSKSFAARFPALITGFYFFMWYFLNVIFNILNKKVYNYFPYPYFVSVIHLLVGVGYCLISWAVGLPKRTPIDKELLLLLTPISLCHALGHVMSNVSFAAVAVSFTHTIKALEPFFNAAASQFVLGHQIPFSLWLSLAPVVLGVSMASLTELSFNWTGFVSAMISNIAFTYRSIYSKKAMTGMDSTNVYAYTSIIALLFCIPPAVMIEGPQLLQHGFKDAIAKVGLQKFLSDLFWIGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSIVVFGNKISTQTGIGTAIAIAGVAIYSFIKANLEEQKRRAAKIPAS 424
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 9011679 9016396 - Tan0013180.1 Tan04g1011 749415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan04g1011 424 SUPERFAMILY Multidrug resistance efflux transporter EmrE 299 406 - -
Tan04g1011 424 SUPERFAMILY Multidrug resistance efflux transporter EmrE 160 254 - -
Tan04g1011 424 Pfam Triose-phosphate Transporter family 119 405 IPR004853 -
Tan04g1011 424 PANTHER SOLUTE CARRIER FAMILY 35 113 406 IPR050186 GO:0005794(PANTHER)|GO:0015297(PANTHER)
Tan04g1011 424 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 117 415 IPR004696 GO:0016020(InterPro)|GO:0022857(InterPro)|GO:0055085(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan03g2514 Tan-Chr3:78495374 Tan04g1011 Tan-Chr4:9011679 7.90E-150 dispersed
Tan04g1011 Tan-Chr4:9011679 Tan10g0406 Tan-Chr10:3269368 1.30E-59 dispersed
Tan04g1011 Tan-Chr4:9011679 Tan04g1012 Tan-Chr4:9011679 1.20E-166 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan04g1011 K15283 - csv:101221040 699.123