Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan04g1012 ATGTGGTACTTCTTAAATGTTATTTTCAACATACTCAACAAAAAAGTCTACAATTATTTCCCATATCCATACTTTGTCTCTGTCATACATCTTCTGGTTGGAGTTGGATATTGTCTCATTTCTTGGGCTGTAGGTCTGCCAAAACGTACTCCGATAGATAAGGAGCTCTTGCTATTATTGACTCCAATTTCGCTATGTCATGCACTTGGACATGTGATGTCGAATGTTTCATTTGCAGCTGTCGCGGTGTCCTTCACTCACACCATTAAAGCTCTGGAGCCATTCTTTAACGCTGCTGCTTCTCAATTTGTTCTGGGACATCAAATTCCCTTCAGCTTGTGGCTTTCTCTAGCACCTGTTGTTTTAGGTGTGTCAATGGCATCACTAACGGAACTTTCCTTCAACTGGACTGGCTTTGTTAGTGCAATGATTTCAAACATTGCATTTACCTACAGAAGTATCTATTCGAAGAAGGCAATGACCGGAATGGACAGTACGAACGTGTATGCATACACCTCCATAATTGCTCTGTTGTTTTGCATTCCTCCTGCAGTAATGATTGAGGGACCGCAGTTGCTGCAGCATGGTTTTAAGGATGCCATTGCCAAAGTGGGTCTTCAAAAGTTCCTATCTGATCTTTTTTGGATCGGCATGTTTTATCATCTATACAATCAGCTTGCCACTAATACTCTTGAACGTGTTGCACCATTAACACATGCTGTAGGAAACGTATTGAAGCGAGTTTTTGTGATTGGGTTCTCCATTGTTGTCTTTGGCAATAAGATTTCAACTCAAACTGGAATCGGTACTGCTATAGCAATTGCCGGTGTCGCCATCTACTCCTTCATTAAAGCAAACTTGGAGGAGCAAAAACGGAGGGCTGCTAAAATTCCAGCCTCATAG 903 41.64 MWYFLNVIFNILNKKVYNYFPYPYFVSVIHLLVGVGYCLISWAVGLPKRTPIDKELLLLLTPISLCHALGHVMSNVSFAAVAVSFTHTIKALEPFFNAAASQFVLGHQIPFSLWLSLAPVVLGVSMASLTELSFNWTGFVSAMISNIAFTYRSIYSKKAMTGMDSTNVYAYTSIIALLFCIPPAVMIEGPQLLQHGFKDAIAKVGLQKFLSDLFWIGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSIVVFGNKISTQTGIGTAIAIAGVAIYSFIKANLEEQKRRAAKIPAS 300
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 9011679 9015295 - Tan0013180.2 Tan04g1012 749416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan04g1012 300 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 1 291 IPR004696 GO:0016020(InterPro)|GO:0022857(InterPro)|GO:0055085(InterPro)
Tan04g1012 300 PANTHER SOLUTE CARRIER FAMILY 35 1 282 IPR050186 GO:0005794(PANTHER)|GO:0015297(PANTHER)
Tan04g1012 300 Pfam Triose-phosphate Transporter family 1 281 IPR004853 -
Tan04g1012 300 SUPERFAMILY Multidrug resistance efflux transporter EmrE 36 130 - -
Tan04g1012 300 SUPERFAMILY Multidrug resistance efflux transporter EmrE 175 282 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan04g1012 Tan-Chr4:9011679 Tan10g0406 Tan-Chr10:3269368 4.60E-59 dispersed
Tan04g1011 Tan-Chr4:9011679 Tan04g1012 Tan-Chr4:9011679 1.20E-166 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan04g1012 K15283 - csv:101221040 555.058