Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan04g1015 ATGTCGTCCGCCGAGAAGGAAAGAGAGACGCAGGTCTACATGGCCAAGCTCGCCGAACAGGCCGAACGCTACGACGAAATGGTGGAGTGTATGAAGAAAGTTGCTAAACTAGATGTTGAGCTAACCGTGGAAGAGAGAAACTTGCTCTCTGTTGGATACAAAAATGTTATAGGTGCTAGGCGAGCTTCTTGGCGTATCATGTCCTCGATTGAACAGAAGGAAGAGTCCAAAAGCAATGAGAATAATGTTAAACTTATTAAGAGTTACCGTCAGAAGGTGGAGGAGGAGCTTTCCAAGATCTGCACCGATATTCTGACTATTATTGACAAGCACCTCATCCCTTCTTCAGCCTCTTCAGAAGCATCGGTTTTCTATTACAAGATGAAAGGTGATTATTACCGATATCTTGCTGAGTTCAAAACAGATCAAGACAGAAAGGAGGCAGCTGACCAGTCATTGAAGGGATACGAGACTGCCTCGACCACCGCAAATGCCGAACTCCCATCAACCCACCCGATCCGTCTTGGCCTTGCTCTCAACTTTTCTGTCTTTTACTATGAGATTATGAATTCTCCTGAAAGGGCTTGCCATTTGGCTAAACAAGCTTTCGACGAGGCAATTGCAGAGTTGGATACTTTGAGTGAGGAATCATACAAGGACAGTACCCTCATAATGCAGTTGCTGAGAGACAATCTCACTCTCTGGACATCTGATTTACCAGAAGATGGAGGTGAAGAGAACTTCAAAGGTGAGGATTCCAAACCGGCAGCACCAGCCCCCGAGCAACATTAA 792 45.71 MSSAEKERETQVYMAKLAEQAERYDEMVECMKKVAKLDVELTVEERNLLSVGYKNVIGARRASWRIMSSIEQKEESKSNENNVKLIKSYRQKVEEELSKICTDILTIIDKHLIPSSASSEASVFYYKMKGDYYRYLAEFKTDQDRKEAADQSLKGYETASTTANAELPSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDLPEDGGEENFKGEDSKPAAPAPEQH 263
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 9034929 9037705 - Tan0004426.1 Tan04g1015 749419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan04g1015 263 PANTHER 14-3-3 PROTEIN 7 241 IPR000308 GO:0005737(PANTHER)|GO:0007165(PANTHER)|GO:0034613(PANTHER)
Tan04g1015 263 FunFam 14-3-3 protein epsilon 3 249 - -
Tan04g1015 263 Coils Coil 14 34 - -
Tan04g1015 263 SMART 1433_4 8 249 IPR023410 -
Tan04g1015 263 MobiDBLite consensus disorder prediction 238 263 - -
Tan04g1015 263 PIRSF 14-3-3 2 248 IPR000308 -
Tan04g1015 263 ProSitePatterns 14-3-3 proteins signature 2. 218 237 IPR023409 -
Tan04g1015 263 MobiDBLite consensus disorder prediction 242 263 - -
Tan04g1015 263 Gene3D - 1 249 IPR036815 -
Tan04g1015 263 PRINTS 14-3-3 protein zeta signature 209 238 IPR000308 -
Tan04g1015 263 PRINTS 14-3-3 protein zeta signature 40 69 IPR000308 -
Tan04g1015 263 PRINTS 14-3-3 protein zeta signature 89 113 IPR000308 -
Tan04g1015 263 PRINTS 14-3-3 protein zeta signature 182 208 IPR000308 -
Tan04g1015 263 PRINTS 14-3-3 protein zeta signature 155 181 IPR000308 -
Tan04g1015 263 PRINTS 14-3-3 protein zeta signature 120 142 IPR000308 -
Tan04g1015 263 ProSitePatterns 14-3-3 proteins signature 1. 46 56 IPR023409 -
Tan04g1015 263 SUPERFAMILY 14-3-3 protein 7 238 IPR036815 -
Tan04g1015 263 Pfam 14-3-3 protein 14 236 IPR023410 -
Tan04g1015 263 Coils Coil 196 216 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan02g2268 Tan-Chr2:91633962 Tan04g1015 Tan-Chr4:9034929 1.10E-131 dispersed
Tan02g2269 Tan-Chr2:91633962 Tan04g1015 Tan-Chr4:9034929 6.20E-126 dispersed
Tan04g1015 Tan-Chr4:9034929 Tan04g1848 Tan-Chr4:57508121 4.60E-95 dispersed
Tan04g1015 Tan-Chr4:9034929 Tan02g2393 Tan-Chr2:92527255 3.60E-108 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan04g1015 K06630 - csv:101221275 478.789