Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan04g1016 ATGCTTTATGCTCTGCTTCGAGATTTAAACCGAAGGCGCTTCCCATTTAGAGTGGTTCTGAACTGGATTATTGAAGGGACTTCAGAAATATTGGACATGAGAAGCTCCTGGGTCAATAAAATATCTGTAATCTTAGGCTCCAAACCACCATTCAGCTGGTTAATTTTGTGCCTCATCAGCGTGCTTGCATTAATTGCAGTACTAGGAACGTCTACTTCAAATGCCTTTGATTCAGTTACTACCACACCAGTGTCTGACATTTATACTAGTTATAGAAGGCAAAAAGAAAGGGCCGCAATTGATTTGTTTGACTTAAAGTCTCTTTCATTAGCCACTACTCGACTCAAAGAGTTTGGGCTTTGTGGAAAAGAAAGAGAAAACCATGTGCCATGTTACAATGTTACAGCAAACATGTTAGTTGGATACAAAGAAGGGGAAGAGTATGATAGGCACTGTGAAGTGTCTAGAACAGCAGAGCGGTGCCTGGTTCGTCCTCCTAAAGACTACAAGATCCCTCTTAGTTGGCCTGTTGGCAGGGATATAATATGGAGTGGAAATGTGAAGATAACAAGGGATCAACTTCTGTCATCTGGGAGCCCTACCAAAAGGTTGATGTTGTTAGAAGAGAACCAAATTGCTTTCCACTCAGAGGATGGAGATGGAGTCAAAGAGTATTCTTTTCAAATTGCAGAGATGATTGGTTTAGGCACTGACTCTGAATTTTTTCAAGCTGGTGTTCGCTCGATACTTGATCTTGGTTGTGGGTTTGGTAGCTTTGGTGCTCATTTAATATCAATGAATGTAATGGTTATGTGCATTGCGACCTATGAGGCGACTGGCAGCCAAGTTCAAATGGCTCTCGAGAGAGGCCTCCCAGCAATGCTTGGGAACTTTATTACAAAACAGCTTCCATATCCATCCCTGTCATTTGACATGGTTCACTGTGCACAGTGCGATATCTCTTGGAACGATAAAGGTGGGATATTCCTTATTGAAGCTGACCGGTTACTAAGACCTGGAGGTTATTTTGTTTTAACCTCTCCCACAGGAAAGACAGTTGGTGGTTCACTGTCTTCCAAGAAGATAAACATTTTGACACCATTGGAAGAGATGACCCGAAGATTATGTTGGACTCTTTTGGCTCAGCAGTATGAAACTTTTGTTTGGCAGAAAACTACAGATCCTCATTGCTATTTATCTCGCAAGCAGGACATTGTACCACTTTGTAAAGAAGGGCATGATACTCCATCATATTATCAACCTCTGGTACCATGCCTAAGTAGTACTACCAGCAAGCGGTGGATTCCAATCCAGAACAGGTCTTCTGGTTCTCATTTGAGTTCAGCTGAACTTGAAGTTCATGGAAAGTATTCTTCCATAATGGTTCTATATATTGTTTTTTCATGTGTTCAATCAGAAGACTACTCTGATGACTTACAAATTTGGCGATCCGCTTTGAAAAACTATTGGTCCTTACTTACACCGTTAATTTTCTCTGACCATCCAAAGAGGCCTGGTGATGAAGATCCATTACCTCCATTTAACATGATACGCAATGTAATGGACATGAATGCCCATTACGGGGGTTTAAATGCTGCGTTTGTGGAGGAGAAGAAAACTGTTTGGGTCATGAATGTTGTGCCCGTTGGGTCTCCCAAGACGCTTCCGCTCATACTTGATCAAGGTTTTGCTGGTGTTCTGCACGATTGGTGTGAACCTTTCCCCACTTATCCACGAACATATGATTTGCTCCATGCAAATGGGCTCATCTCACAGCTACTTTCAAGTAGGTGCAGTATGATTGAATTATTAGTGGAGATGGATCGTATACTGCGCCCTGAGGGATGGGTTGTCCTAAAGGACAAAGTGGGACCGATAGAGAAGGTGCGAATGCTTGCTACACAGATTCGTTGGGAGGCAAGGGTGATCGACTTTCAGAATGGCAGTGATCAGAGGCTCCTTGTTTGCCAGAAACCATTCGTGAAAAAATGA 1992 42.52 MLYALLRDLNRRRFPFRVVLNWIIEGTSEILDMRSSWVNKISVILGSKPPFSWLILCLISVLALIAVLGTSTSNAFDSVTTTPVSDIYTSYRRQKERAAIDLFDLKSLSLATTRLKEFGLCGKERENHVPCYNVTANMLVGYKEGEEYDRHCEVSRTAERCLVRPPKDYKIPLSWPVGRDIIWSGNVKITRDQLLSSGSPTKRLMLLEENQIAFHSEDGDGVKEYSFQIAEMIGLGTDSEFFQAGVRSILDLGCGFGSFGAHLISMNVMVMCIATYEATGSQVQMALERGLPAMLGNFITKQLPYPSLSFDMVHCAQCDISWNDKGGIFLIEADRLLRPGGYFVLTSPTGKTVGGSLSSKKINILTPLEEMTRRLCWTLLAQQYETFVWQKTTDPHCYLSRKQDIVPLCKEGHDTPSYYQPLVPCLSSTTSKRWIPIQNRSSGSHLSSAELEVHGKYSSIMVLYIVFSCVQSEDYSDDLQIWRSALKNYWSLLTPLIFSDHPKRPGDEDPLPPFNMIRNVMDMNAHYGGLNAAFVEEKKTVWVMNVVPVGSPKTLPLILDQGFAGVLHDWCEPFPTYPRTYDLLHANGLISQLLSSRCSMIELLVEMDRILRPEGWVVLKDKVGPIEKVRMLATQIRWEARVIDFQNGSDQRLLVCQKPFVKK 663
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 9041783 9045531 - Tan0008259.1 Tan04g1016 749420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan04g1016 663 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 127 658 IPR004159 GO:0008168(InterPro)
Tan04g1016 663 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 56 660 IPR004159 GO:0005737(PANTHER)|GO:0008168(InterPro)
Tan04g1016 663 Gene3D Vaccinia Virus protein VP39 236 414 IPR029063 -
Tan04g1016 663 FunFam probable pectin methyltransferase QUA2 210 392 - -
Tan04g1016 663 CDD AdoMet_MTases 249 346 - -
Tan04g1016 663 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 167 349 IPR029063 -
Tan04g1016 663 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 482 640 IPR029063 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan02g2259 Tan-Chr2:91591751 Tan04g1016 Tan-Chr4:9041783 1.50E-197 dispersed
Tan02g2399 Tan-Chr2:92566503 Tan04g1016 Tan-Chr4:9041783 7.00E-180 dispersed
Tan04g1016 Tan-Chr4:9041783 Tan11g0668 Tan-Chr11:5859277 2.00E-94 dispersed
Tan04g1016 Tan-Chr4:9041783 Tan01g3792 Tan-Chr1:102755178 4.90E-186 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan04g1016 K23870 - csv:101213009 1269.6