Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan04g1036 | ATGGGTGACGATGAACATGAGCAGCCACCGTCGTCGGTGCCGCCGCCGTCGTCGAAATCTAAAGCTTTTCCGTTGCGGCCCACTATTAATCTGCCGCCACGGACCTCTATGGAGTCGCTCTTCAGCGGTGGGCCGGGTTTGGGACTCGGGTTTAGCCCCGGGCCCATGACTCTCGTCTCGAGCTTCTTTTCCGATTCAGACGACTGCAAGTCTTTTTCTCAGCTCCTCGCCGGAGCTATGGCGTCGCCGGTGGCTGTTCCTACGCCGGCGTCTGAGCTCAAGGCCCCTGCCGGTCTGCTCGATTCTCCGGGGCTTTTTTCGCCTGGTCAGGGACCTTTTGGAATGACACATCAGCAGGCTTTGGCTCAGGTTACTATGCAGGCTGCACAAGCCTATTCTCATAAGCAAATACAAGAAGAATCTTTTTCTTCATCACTAGAACGCTCTGCATCCTCCTCAAAGCTTTTGACAACCTTTCCGGGTGAGAAGTCTAAAGATCAGCCGGTGCCACTTCCATTGCTGAACTCTGCAGTTGCATCCAAGGAATCATCGGATATCTCTCAATCAGATCAGAGATTGCAATCTTCTTCGAGTAATGTTGATAGGCCTGCTGACGACGGCTACAATTGGAGAAAATATGGACAGAAACAAGTGAAAGGCAGTGAATTTCCTCGAAGCTACTACAAGTGCACGCACCCAAATTGTCCCGTCAAGAAAAAGGTTGAACGATCTCTGGAAGGCCAAGTCACTGAAATTATCTACAAGGGTGAGCATAACCACGAACGACCTCAACCGAACAAGCGGGCAAAGGATGTTGGAAATTCTAACGGATATTCAAGTATTCATGGAAATCCTATGCTATCTTCTCAAGTTCAGAGTGGATATTTGAATAAATTGAATGAGCAGACAGCTGTGTCTTCCATAGCAAAGAAGGATCAAGAATTGAGTCATGTTACACATGAACAGTTGTTGGGTATTAGTGATGGTGAGGGAGGGGGTGAGATAGAAACGGGAGTGAATCGAAAAGATGAAGACGAACCTGACGCCAAGAGACAGAATACTGAGGTTAGAGTTTCTGAGCCAGCATCTTCTCATAGGACGCTCACAGAATCCAGAATCATTGTGCAGACTACAAGTGAAGTCGATCTATTGGATGATGGCTACAGGTGGCGAAAGTATGGGCAGAAAACGGTTAAAGGAAACCCTTACCCCAGGAGCTATTATAAATGCACGACTCCGGGATGCAATGTCCGTAAACATGTTGAGAGAGCTTCGACAGACCAGAAAGCTGTCATAACGACGTATGAGGGTAAACACAATCATGATGTTCCAGCTGGTAAAATCAGCAGCCACAGTACAGTCAACAGTAACGTTCCTCAGCTAAAATCACAAAATATTGCTACTGAGAAAAAAGTTTCAAGTAACAACACTGATCCTGGGAACTCTCGTCAACAGCCCGTTGGACTTCTACGGTTAAAGAAAGAACAGATAATATAG | 1497 | 47.29 | MGDDEHEQPPSSVPPPSSKSKAFPLRPTINLPPRTSMESLFSGGPGLGLGFSPGPMTLVSSFFSDSDDCKSFSQLLAGAMASPVAVPTPASELKAPAGLLDSPGLFSPGQGPFGMTHQQALAQVTMQAAQAYSHKQIQEESFSSSLERSASSSKLLTTFPGEKSKDQPVPLPLLNSAVASKESSDISQSDQRLQSSSSNVDRPADDGYNWRKYGQKQVKGSEFPRSYYKCTHPNCPVKKKVERSLEGQVTEIIYKGEHNHERPQPNKRAKDVGNSNGYSSIHGNPMLSSQVQSGYLNKLNEQTAVSSIAKKDQELSHVTHEQLLGISDGEGGGEIETGVNRKDEDEPDAKRQNTEVRVSEPASSHRTLTESRIIVQTTSEVDLLDDGYRWRKYGQKTVKGNPYPRSYYKCTTPGCNVRKHVERASTDQKAVITTYEGKHNHDVPAGKISSHSTVNSNVPQLKSQNIATEKKVSSNNTDPGNSRQQPVGLLRLKKEQII | 498 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 9248866 | 9253500 | + | Tan0006913.1 | Tan04g1036 | 749440 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan04g1036 | 498 | SMART | WRKY_cls | 384 | 443 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Tan04g1036 | 498 | SMART | WRKY_cls | 204 | 262 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Tan04g1036 | 498 | MobiDBLite | consensus disorder prediction | 335 | 355 | - | - | |
Tan04g1036 | 498 | MobiDBLite | consensus disorder prediction | 322 | 366 | - | - | |
Tan04g1036 | 498 | SUPERFAMILY | WRKY DNA-binding domain | 203 | 263 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Tan04g1036 | 498 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 137 | 468 | IPR044810 | GO:0003700(InterPro) | |
Tan04g1036 | 498 | ProSiteProfiles | WRKY domain profile. | 205 | 263 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Tan04g1036 | 498 | SUPERFAMILY | WRKY DNA-binding domain | 376 | 444 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Tan04g1036 | 498 | MobiDBLite | consensus disorder prediction | 1 | 29 | - | - | |
Tan04g1036 | 498 | Gene3D | WRKY domain | 369 | 445 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Tan04g1036 | 498 | Gene3D | WRKY domain | 188 | 264 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Tan04g1036 | 498 | FunFam | WRKY transcription factor | 192 | 264 | - | - | |
Tan04g1036 | 498 | MobiDBLite | consensus disorder prediction | 177 | 203 | - | - | |
Tan04g1036 | 498 | FunFam | WRKY transcription factor 33 | 371 | 437 | - | - | |
Tan04g1036 | 498 | MobiDBLite | consensus disorder prediction | 254 | 268 | - | - | |
Tan04g1036 | 498 | Pfam | WRKY DNA -binding domain | 205 | 261 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Tan04g1036 | 498 | Pfam | WRKY DNA -binding domain | 385 | 442 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Tan04g1036 | 498 | MobiDBLite | consensus disorder prediction | 254 | 294 | - | - | |
Tan04g1036 | 498 | ProSiteProfiles | WRKY domain profile. | 379 | 444 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Tan04g1036 | 498 | MobiDBLite | consensus disorder prediction | 153 | 215 | - | - | |
Tan04g1036 | 498 | MobiDBLite | consensus disorder prediction | 269 | 294 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan02g0456 | Tan-Chr2:4293249 | Tan04g1036 | Tan-Chr4:9248866 | 2.00E-55 | dispersed | |
Tan04g1036 | Tan-Chr4:9248866 | Tan04g1038 | Tan-Chr4:9248866 | 1.10E-195 | dispersed | |
Tan04g1036 | Tan-Chr4:9248866 | Tan04g1037 | Tan-Chr4:9248866 | 1.60E-274 | tandem | |
Tan08g1942 | Tan-Chr8:71584308 | Tan04g1036 | Tan-Chr4:9248866 | 3.60E-56 | transposed | |
Tan11g0469 | Tan-Chr11:3856132 | Tan04g1036 | Tan-Chr4:9248866 | 7.00E-85 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
27214 | PF03106 | WRKY | 3.30E-25 | CL0274 | Tan | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan04g1036 | - | - | - | 0.0 |