Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan04g1037 | ATGGGTGACGATGAACATGAGCAGCCACCGTCGTCGGTGCCGCCGCCGTCGTCGAAATCTAAAGCTTTTCCGTTGCGGCCCACTATTAATCTGCCGCCACGGACCTCTATGGAGTCGCTCTTCAGCGGTGGGCCGGGTTTGGGACTCGGGTTTAGCCCCGGGCCCATGACTCTCGTCTCGAGCTTCTTTTCCGATTCAGACGACTGCAAGTCTTTTTCTCAGCTCCTCGCCGGAGCTATGGCGTCGCCGGTGGCTGTTCCTACGCCGGCGTCTGAGCTCAAGGCCCCTGCCGGTCTGCTCGATTCTCCGGGGCTTTTTTCGCCTGGTCAGGCTTTGGCTCAGGTTACTATGCAGGCTGCACAAGCCTATTCTCATAAGCAAATACAAGAAGAATCTTTTTCTTCATCACTAGAACGCTCTGCATCCTCCTCAAAGCTTTTGACAACCTTTCCGGGTGAGAAGTCTAAAGATCAGCCGGTGCCACTTCCATTGCTGAACTCTGCAGTTGCATCCAAGGAATCATCGGATATCTCTCAATCAGATCAGAGATTGCAATCTTCTTCGAGTAATGTTGATAGGCCTGCTGACGACGGCTACAATTGGAGAAAATATGGACAGAAACAAGTGAAAGGCAGTGAATTTCCTCGAAGCTACTACAAGTGCACGCACCCAAATTGTCCCGTCAAGAAAAAGGTTGAACGATCTCTGGAAGGCCAAGTCACTGAAATTATCTACAAGGGTGAGCATAACCACGAACGACCTCAACCGAACAAGCGGGCAAAGGATGTTGGAAATTCTAACGGATATTCAAGTATTCATGGAAATCCTATGCTATCTTCTCAAGTTCAGAGTGGATATTTGAATAAATTGAATGAGCAGACAGCTGTGTCTTCCATAGCAAAGAAGGATCAAGAATTGAGTCATGTTACACATGAACAGTTGTTGGGTATTAGTGATGGTGAGGGAGGGGGTGAGATAGAAACGGGAGTGAATCGAAAAGATGAAGACGAACCTGACGCCAAGAGACAGAATACTGAGGTTAGAGTTTCTGAGCCAGCATCTTCTCATAGGACGCTCACAGAATCCAGAATCATTGTGCAGACTACAAGTGAAGTCGATCTATTGGATGATGGCTACAGGTGGCGAAAGTATGGGCAGAAAACGGTTAAAGGAAACCCTTACCCCAGGAGCTATTATAAATGCACGACTCCGGGATGCAATGTCCGTAAACATGTTGAGAGAGCTTCGACAGACCAGAAAGCTGTCATAACGACGTATGAGGGTAAACACAATCATGATGTTCCAGCTGGTAAAATCAGCAGCCACAGTACAGTCAACAGTAACGTTCCTCAGCTAAAATCACAAAATATTGCTACTGAGAAAAAAGTTTCAAGTAACAACACTGATCCTGGGAACTCTCGTCAACAGCCCGTTGGACTTCTACGGTTAAAGAAAGAACAGATAATATAG | 1470 | 47.28 | MGDDEHEQPPSSVPPPSSKSKAFPLRPTINLPPRTSMESLFSGGPGLGLGFSPGPMTLVSSFFSDSDDCKSFSQLLAGAMASPVAVPTPASELKAPAGLLDSPGLFSPGQALAQVTMQAAQAYSHKQIQEESFSSSLERSASSSKLLTTFPGEKSKDQPVPLPLLNSAVASKESSDISQSDQRLQSSSSNVDRPADDGYNWRKYGQKQVKGSEFPRSYYKCTHPNCPVKKKVERSLEGQVTEIIYKGEHNHERPQPNKRAKDVGNSNGYSSIHGNPMLSSQVQSGYLNKLNEQTAVSSIAKKDQELSHVTHEQLLGISDGEGGGEIETGVNRKDEDEPDAKRQNTEVRVSEPASSHRTLTESRIIVQTTSEVDLLDDGYRWRKYGQKTVKGNPYPRSYYKCTTPGCNVRKHVERASTDQKAVITTYEGKHNHDVPAGKISSHSTVNSNVPQLKSQNIATEKKVSSNNTDPGNSRQQPVGLLRLKKEQII | 489 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 9248866 | 9253500 | + | Tan0006913.2 | Tan04g1037 | 749441 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan04g1037 | 489 | ProSiteProfiles | WRKY domain profile. | 196 | 254 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Tan04g1037 | 489 | SUPERFAMILY | WRKY DNA-binding domain | 367 | 435 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Tan04g1037 | 489 | Gene3D | WRKY domain | 179 | 255 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Tan04g1037 | 489 | Gene3D | WRKY domain | 360 | 436 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Tan04g1037 | 489 | MobiDBLite | consensus disorder prediction | 168 | 194 | - | - | |
Tan04g1037 | 489 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 127 | 459 | IPR044810 | GO:0003700(InterPro) | |
Tan04g1037 | 489 | MobiDBLite | consensus disorder prediction | 326 | 346 | - | - | |
Tan04g1037 | 489 | ProSiteProfiles | WRKY domain profile. | 370 | 435 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Tan04g1037 | 489 | MobiDBLite | consensus disorder prediction | 245 | 259 | - | - | |
Tan04g1037 | 489 | MobiDBLite | consensus disorder prediction | 144 | 206 | - | - | |
Tan04g1037 | 489 | SUPERFAMILY | WRKY DNA-binding domain | 194 | 254 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Tan04g1037 | 489 | SMART | WRKY_cls | 375 | 434 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Tan04g1037 | 489 | SMART | WRKY_cls | 195 | 253 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Tan04g1037 | 489 | MobiDBLite | consensus disorder prediction | 313 | 355 | - | - | |
Tan04g1037 | 489 | FunFam | WRKY transcription factor 33 | 362 | 428 | - | - | |
Tan04g1037 | 489 | FunFam | WRKY transcription factor | 183 | 255 | - | - | |
Tan04g1037 | 489 | Pfam | WRKY DNA -binding domain | 196 | 252 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Tan04g1037 | 489 | Pfam | WRKY DNA -binding domain | 376 | 433 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Tan04g1037 | 489 | MobiDBLite | consensus disorder prediction | 245 | 277 | - | - | |
Tan04g1037 | 489 | MobiDBLite | consensus disorder prediction | 1 | 28 | - | - | |
Tan04g1037 | 489 | MobiDBLite | consensus disorder prediction | 260 | 277 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan04g1037 | Tan-Chr4:9248866 | Tan11g0459 | Tan-Chr11:3714800 | 3.40E-91 | dispersed | |
Tan04g1036 | Tan-Chr4:9248866 | Tan04g1037 | Tan-Chr4:9248866 | 1.60E-274 | tandem | |
Tan04g1037 | Tan-Chr4:9248866 | Tan04g1038 | Tan-Chr4:9248866 | 1.90E-187 | tandem |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
27215 | PF03106 | WRKY | 3.20E-25 | CL0274 | Tan | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan04g1037 | - | - | - | 0.0 |