Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan04g1055 ATGACGAGAGCTTTTAGAAGACGAACTTCGTATTCAAGGCACGTAGATCGCCTCCGATTCCGAGAATCGGCGGACGGTGCTTCAAAATCTGGATCTTTGAAAGGGATGAAGCTGAAGGAGATCTTGACTTCTTTACTAATAGGTTTTCCGTTGGTCGTTTTTGTTATTTTGGTGCTTAGGAATCCGGCAGTGGATCTCTCTCTGGGTTTTGCCGAAGCCAGAGCATTGGAAAGAGTGGGCACTAATGGCAGTTCTGAGAGTTCAGGTTCAGAAAATGGCTTCTCTCGACTTTCCAATAGAGACAAACTTATTGGAGGCCTTCTCATTCCAGGATTTGATGAAGGATCATGCTTGAGCAGATATCAATCCAGTTTATATAGAACTTCAAACCACAAACCTTCTCCTTACCTCCTCTCGAAACTTAGAGACTACGAAGCGCTTCATCGACGCTGTGGTCCCCATACAAAACCTTATGATGAAGCAGTAGAGCAACTCAGATCTGGCAGTAGTGCTAGTTTGACAGAGTGTAAATATGTTGTATGGATATCTTATAGTGGCTTGGGAAACAAAATACTCACTTTGGCTTCTGCATTCCTCTATGCCCTCATTACCAACCGTGTCTTGCTTGTTGACCCGGGGAAGGATATGGCTGATCTATTTTGTGAGCCCTTCCCAGAAAAATCTTGGTTGCTACCAAATGACTTCCCCTTGATGGATCAATTCAGCAACTTGGATCCAAAATCTCCTAATTGTCATGGAAATATGCTGAAGATGAACACTCTAAACACGTCGACAGAATCGCTCCCGTCGTATCTATATCTTCATTTGGTACATGATTATGATGATCATGATAAACTATTCTTTTGTGATCAAGAACAGGCTCTTTTAGGCAGAGTCCCTTGGCTAATACTCAAGACAGATAACTACTTTGTTCCATCTCTCTTTTTGATCCCATCTTTCGAGCACGAACTGGGTAACTTATTTCCCCGAAAAGATACCACCTTCCATCATCTGGGCCGGTATCTTTTCCACCCATCAAATCATGTTTGGGGACTAATTACGAGATACTACGAAGCATACCTATTAAATGCAGATGAAAGAATAGGAATTCAAGTAAGAGTGTTCGAGAGCGAACCGGGACCATTCAAACATATAATGGATCAGATTTTAGACTGCACCCTCAAGGAGAAGTTACTGCCTGAGGTAAACAAGGAAGGATTGTCTTCCATTACTTTGGAACGCCCAAGAGTAAAAGCTGTTTTGATGACATCTTTAAGTTCTGGATATTATGAAAAAATGAGAACTTTGTACTGGGAAAACCCGACCACAACCGGAGAGGTCATCGCAGTTTACCAGCCGAGCTACGAAATGTATCAGCAGACAGAGAAGAAGACTCACAACAGGAAAGCATGGGCAGAAATGTACCTTCTGAGTTTGAGTGATGTATTGGTGACCAGTGCATGGTCGACATTCGGCTATGTGGCTCAAGGTCTCGGCGGATCAAAGCCATGGATTCTTTACAAGGCGGAGAACATGACCTCGCCCAATCCACCATGTCGTCGGGCAATGTCAATGGAGCCTTGCTTTCATGCTCCTCCATTCTATGACTGCAAGGCAAAGAAAGGAATAGATACTGGTGCAGTTGTTCCCCATGTAAGACACTGTGAAGACATGAGCTGGGGGCTTAAGCTTGTTGATCATGAGGATCTATTTAACATCCACTGA 1725 43.54 MTRAFRRRTSYSRHVDRLRFRESADGASKSGSLKGMKLKEILTSLLIGFPLVVFVILVLRNPAVDLSLGFAEARALERVGTNGSSESSGSENGFSRLSNRDKLIGGLLIPGFDEGSCLSRYQSSLYRTSNHKPSPYLLSKLRDYEALHRRCGPHTKPYDEAVEQLRSGSSASLTECKYVVWISYSGLGNKILTLASAFLYALITNRVLLVDPGKDMADLFCEPFPEKSWLLPNDFPLMDQFSNLDPKSPNCHGNMLKMNTLNTSTESLPSYLYLHLVHDYDDHDKLFFCDQEQALLGRVPWLILKTDNYFVPSLFLIPSFEHELGNLFPRKDTTFHHLGRYLFHPSNHVWGLITRYYEAYLLNADERIGIQVRVFESEPGPFKHIMDQILDCTLKEKLLPEVNKEGLSSITLERPRVKAVLMTSLSSGYYEKMRTLYWENPTTTGEVIAVYQPSYEMYQQTEKKTHNRKAWAEMYLLSLSDVLVTSAWSTFGYVAQGLGGSKPWILYKAENMTSPNPPCRRAMSMEPCFHAPPFYDCKAKKGIDTGAVVPHVRHCEDMSWGLKLVDHEDLFNIH 574
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 9399811 9403032 + Tan0003839.1 Tan04g1055 749459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan04g1055 574 Pfam Xyloglucan fucosyltransferase 98 538 IPR004938 GO:0008107(InterPro)|GO:0016020(InterPro)|GO:0042546(InterPro)
Tan04g1055 574 FunFam Galactoside 2-alpha-L-fucosyltransferase 174 225 - -
Tan04g1055 574 Gene3D - 173 224 - -
Tan04g1055 574 PANTHER FUCOSYLTRANSFERASE 2-RELATED 32 567 IPR004938 GO:0005794(PANTHER)|GO:0008107(InterPro)|GO:0009969(PANTHER)|GO:0016020(InterPro)|GO:0042546(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g0973 Tan-Chr1:9484535 Tan04g1055 Tan-Chr4:9399811 9.70E-156 transposed
Tan04g1055 Tan-Chr4:9399811 Tan05g2424 Tan-Chr5:75408324 4.40E-199 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan04g1055 K13681 - csv:101216541 1025.0