Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan04g1118 ATGGAGGTAATCGCTGAAGATGGGAAAGTTGAGTCTCGGGTTGTGAGCGAATCGAAGGGGAAGAAGAAGCAGAAGAACAACAAGGAACAAGTTGAAACTGTGGAAGAGGAGACTGGTTGTTGGATTGCTCTGAGGATTTTTGGCAGCTGCATTTCTTCAAGATCCAAAGTTGATAGTTCGATCAGTGGGACTAGTATTAACTATGCTGAAAGCAAGTCTACGGCTGATTCAAGTAGAGACCAACCAACACCTCGAGAGATATCTTCTACAAACACAAGTATGAGTAACGCAGAGAGTAATTCATCCACTTCCAAACTAGAAGAGGAACTAAAAATTTCTCCTCATTTACGGAAATTTTCATTCAATGATCTTAAGTTGGCTACAAGGAACTTCAGACCGGAGAGTCTTCTTGGTGAGGGTGGTTTTGGTTGTGTTTTTAAGGGTTGGGTTGAAGAAAATGGAACTGCTCCAGTTAAACCTGGCACGGGACTCACTGTTGCTGTTAAAACCCTCAACCATGATGGTCTTCAGGGCCATAAAGAGTGGATGGCTGAAGTGAATTTTCTTAGTGATCTCAAACATCCCAACTTGGTCAAACTCATCGGTTACTGCAATGAAGATGATCAAAGACTGCTTGTATATGAGTTCATGCCTAGAGGAAGCCTGGAGAATCATCTTTTCCGGAGATCTCTACCTCTTCCGTGGTCTATTAGGATGAAAATTGCACTAGGTGCTGCCAAGGGTCTTGCTTTCCTCCATGAGGAAGCAAAAAGGCCAGTGATATATCGTGATTTTAAAACATCCAACATCCTATTAGATGCCGAATACAATGCCAAGCTTTCTGATTTTGGACTTGCAAAAGATGGACCCGATGGAGATAAAACCCATGTCTCTACTCGTGTGATGGGAACATATGGCTATGCAGCTCCAGAATACGTAATGACGGGACATCTTACATCAAGGAGTGATGTGTACAGTTTCGGAGTGGTTCTTCTTGAAATGTTAACTGGCAGAAGATCCATGGATAAAAACCGTCCCAATGGTGAACATAACCTTGTGGAATGGGCACGGCCATACCTAGGAGAGAAAAAGAGATTCTATCGTTTGATAGACCCTAGGCTTGAAGGCCATTTCTCAATAAAAGGTGCCCAAAAAGCAGTACAATTGGCTGCTCAATGCCTTAGCCGAGATCAAAAGGTCAGACCGTTAATGAGTGAAGTTGTTGAAGCCTTGAAGCCTCTCCCAAACCTCAAGGACATGGCAAGTTCATCTTATTATTTTCAGACAATGCAAGCTGACCGCATCCGATCTAGCCCAATGGCGAGAAATGGCTATCATACAGCTGCAGGACCAGTTCCGAAGAACGGGCAGCAACTACGCAGCCATTCAATCGCCAATGGATCTCATGCTTCTCCATTTCATCATCAGCAACCCCATCCATCTCCAAAACCCAATGTCAAACCCTAA 1467 43.83 MEVIAEDGKVESRVVSESKGKKKQKNNKEQVETVEEETGCWIALRIFGSCISSRSKVDSSISGTSINYAESKSTADSSRDQPTPREISSTNTSMSNAESNSSTSKLEEELKISPHLRKFSFNDLKLATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWMAEVNFLSDLKHPNLVKLIGYCNEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAKRPVIYRDFKTSNILLDAEYNAKLSDFGLAKDGPDGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPYLGEKKRFYRLIDPRLEGHFSIKGAQKAVQLAAQCLSRDQKVRPLMSEVVEALKPLPNLKDMASSSYYFQTMQADRIRSSPMARNGYHTAAGPVPKNGQQLRSHSIANGSHASPFHHQQPHPSPKPNVKP 488
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 10230109 10237766 - Tan0000499.2 Tan04g1118 749522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan04g1118 488 Gene3D Phosphorylase Kinase; domain 1 89 216 - -
Tan04g1118 488 PANTHER OS01G0588500 PROTEIN-RELATED 97 415 IPR050823 -
Tan04g1118 488 SMART serkin_6 131 414 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan04g1118 488 MobiDBLite consensus disorder prediction 69 103 - -
Tan04g1118 488 Gene3D Transferase(Phosphotransferase) domain 1 217 433 - -
Tan04g1118 488 FunFam Probable serine/threonine-protein kinase PBL8 217 432 - -
Tan04g1118 488 CDD STKc_IRAK 137 414 - -
Tan04g1118 488 ProSitePatterns Protein kinases ATP-binding region signature. 137 169 IPR017441 GO:0005524(InterPro)
Tan04g1118 488 FunFam Serine/threonine-protein kinase BIK1 98 216 - -
Tan04g1118 488 MobiDBLite consensus disorder prediction 454 475 - -
Tan04g1118 488 ProSitePatterns Serine/Threonine protein kinases active-site signature. 260 272 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan04g1118 488 SUPERFAMILY Protein kinase-like (PK-like) 107 411 IPR011009 -
Tan04g1118 488 ProSiteProfiles Protein kinase domain profile. 131 417 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan04g1118 488 Pfam Protein tyrosine and serine/threonine kinase 135 411 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan04g1118 488 MobiDBLite consensus disorder prediction 69 107 - -
Tan04g1118 488 MobiDBLite consensus disorder prediction 441 488 - -
Tan04g1118 488 MobiDBLite consensus disorder prediction 1 32 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan04g1118 Tan-Chr4:10230109 Tan04g1120 Tan-Chr4:10230109 5.10E-281 dispersed
Tan04g1117 Tan-Chr4:10230109 Tan04g1118 Tan-Chr4:10230109 5.10E-281 tandem
Tan04g1118 Tan-Chr4:10230109 Tan04g1119 Tan-Chr4:10230109 5.10E-281 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67450 PF07714 PK_Tyr_Ser-Thr 9.90E-47 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan04g1118 - - - 0.0