Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan04g1137 ATGCCTTCTCCATCTTCCTCTTTTACTGTTTCCGCCATTGTTATCTTCTTCGTCTTCCTTCAGCTCTCTCCTTTGTTTTCAGCTGATGGCCACCTTCAGTCTTTCAGATTTCCCTGTCCACCTTTCTCTTCCAAACCTGTTTACCCATTTTCCTCTGTTCCTGGTTCTGGACATCCTTCTTTTCAGGTACGTTGCTCTTCTCCCCACTCTGTTATTTCCATTAATGGCCTTTCTTTTTCTCTCTTGAGTTTCAATACGACCTCCACCACTCTCCTCCTTTCCCCTCTTCCCCTCAATGTCACTCCCACTGTCGAACAATCGAACCACACCTGCTTTTCTGTTCGTTTCTCTTCCATTCCGAGTCGTTCGATTAATCTCTCTGGCTCCCCGTTCCGAATCTCAGATGGGTATTGCTCTAGACTCTCTCTTCTTATCCCCTGTTCGCCTCCGCATCTTCCCAATTGCAGCCATTGTCCTTGGGAGTGTAATCTTATCAAGAAACCAGTTAATTTGCTCCATGGATGCGGCGTCCAGCATCAGTCCTTTTCGGAGCAAGGTTGTCAGGGCGAGGTCTTGGAGTATTTAGATAGAATTCTCAGATTGGGGCTTGAAGTTGAGTGGGATACAGATCAGGACCCTTACTTTATCAAGTGTAATGATTGTGAAGCTAAAAATGGTGATTGTGGCTTCAATGCCTCAGACCCAGATAGGCAATTTATTTGCTATCATACTCAAACTCGATACTCATATCCTAATAGAATCGCGATTTTGTCCTCTGTTTTCGCGTTGGTGTGCTTGTTATTGGTTATTGCGGTCACCATGGCTTTTTTCAGGTCGAGATGGTTGAGATCCCTCGCCATTGAAGTAGACCCCACAACCCAGTTCCTCAGTCGTCATCGTTCACCCAATCTTCTCCCTCCAGTTTTCCCCTACGAAGAACTCGAATCCTCAACCAATCGATTCGACCCCAAGAGGAAACTGGGCGACGGTGGGTTTGGATCTGTTTATTTGGGTCAGCTCAACGATGGCCGATTAGTGGCTGTGAAGTATCTTCACAAGCACCACGCCGCCGCCGCCGCCCCTTCCTGTAGGGCTTTCTTCACCAAGTCGTTCTGTAACGAAATCTTGATTCTTTCTTCGATTAATCACCCAAATCTCGTTAGGTTGCATGGGTATTGTAGCGACCCAAGAGGGCTTATTCTTGTCTATGATTACGTCCCAAATGGGACGCTCGCCGACCATCTCCATGGCCCTAAGAGCTTGTACCGGAAGGGATCTCTGACCTGGCAAGTGAGGATTGACATTGCTCTGCAAATCGCCATGGCTATGGAGTATTTGCATTTCTCTGTGGTGCCGCCGATTGTTCACAGAGACATTACCTCTTCCAACATTTTTGTGGAGAAAGATATGAGAATCAAAGTTGGGGATTTTGGGCTTTCGAGGCTGTTGGTTTTCTCAGATACGACGTCGTCTTCATCTGGGTATGTCTGCACCGGACCTCAGGGGACACCCGGTTACTTGGATCCGGATTACCACCGGTCGTTCCGGTTGACGGAGAAAAGTGACGTGTACAGCTTTGGAGTGGTATTATTGGAGCTGATTTCTGGTCTGAAAGCGGTGGATCAGAGTCGAGAGAGAAGAGAAATGGCGCTGGCTGATCTGGTAGTGTCGAAGATCCAAATGGGTCAGCTTCATCAGGTGGTGGACTCCGTTTTGGGTATCGACGGCGAGGTAATCGACGGCGTTGAGGCGGTGGCAGAGCTGGCGTTCCGGTGCGTGGCGGCGGACAAGGACGACCGCCCCGACGCCAAGGAGATCGTGGAGGAGCTCCGGCGGATTCGGAACTGTACACGTGGAGGGGTCCGGTCGTCGATTTCAAACGTGAGTGCTGACGTGGCTAGAAGTTGA 1908 49.32 MPSPSSSFTVSAIVIFFVFLQLSPLFSADGHLQSFRFPCPPFSSKPVYPFSSVPGSGHPSFQVRCSSPHSVISINGLSFSLLSFNTTSTTLLLSPLPLNVTPTVEQSNHTCFSVRFSSIPSRSINLSGSPFRISDGYCSRLSLLIPCSPPHLPNCSHCPWECNLIKKPVNLLHGCGVQHQSFSEQGCQGEVLEYLDRILRLGLEVEWDTDQDPYFIKCNDCEAKNGDCGFNASDPDRQFICYHTQTRYSYPNRIAILSSVFALVCLLLVIAVTMAFFRSRWLRSLAIEVDPTTQFLSRHRSPNLLPPVFPYEELESSTNRFDPKRKLGDGGFGSVYLGQLNDGRLVAVKYLHKHHAAAAAPSCRAFFTKSFCNEILILSSINHPNLVRLHGYCSDPRGLILVYDYVPNGTLADHLHGPKSLYRKGSLTWQVRIDIALQIAMAMEYLHFSVVPPIVHRDITSSNIFVEKDMRIKVGDFGLSRLLVFSDTTSSSSGYVCTGPQGTPGYLDPDYHRSFRLTEKSDVYSFGVVLLELISGLKAVDQSRERREMALADLVVSKIQMGQLHQVVDSVLGIDGEVIDGVEAVAELAFRCVAADKDDRPDAKEIVEELRRIRNCTRGGVRSSISNVSADVARS 635
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 10612012 10614335 + Tan0000545.1 Tan04g1137 749541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan04g1137 635 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 45 618 IPR044652 GO:0004672(InterPro)|GO:0016301(PANTHER)|GO:0016310(PANTHER)
Tan04g1137 635 ProSitePatterns Tyrosine protein kinases specific active-site signature. 454 466 IPR008266 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan04g1137 635 FunFam Putative serine/threonine-protein kinase At1g18390 family 297 405 - -
Tan04g1137 635 Pfam Wall-associated receptor kinase C-terminal 190 244 IPR032872 -
Tan04g1137 635 Gene3D Transferase(Phosphotransferase) domain 1 406 627 - -
Tan04g1137 635 CDD STKc_IRAK 327 613 - -
Tan04g1137 635 Gene3D Phosphorylase Kinase; domain 1 296 405 - -
Tan04g1137 635 Pfam Protein kinase domain 323 608 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan04g1137 635 SUPERFAMILY Protein kinase-like (PK-like) 301 610 IPR011009 -
Tan04g1137 635 ProSiteProfiles Protein kinase domain profile. 321 613 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan04g1137 635 ProSitePatterns Protein kinases ATP-binding region signature. 327 349 IPR017441 GO:0005524(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan04g1137 Tan-Chr4:10612012 Tan05g2238 Tan-Chr5:73307977 1.60E-77 dispersed
Tan04g1137 Tan-Chr4:10612012 Tan05g2236 Tan-Chr5:73305477 3.70E-74 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67453 PF00069 Pkinase 1.10E-43 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan04g1137 - - - 0.0