Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan04g1142 | ATGGCAAAACATCAAGACGTGAAGCTTCTGGGTTTGTGGAGTAGTCCATTTGTGATGAGGGCCAGAATCGCCCTCAATATCAAATCTGTAAACTACGAGTTTCTTGAGGAAACATTCGGATCCAAAAGCCAGCTCCTTCTCCAATCCAACCCTGTTCATAAGAAAATCCCTGTTCTCATTCATCACAATAACCCCATCGCCGAATCCTTAATCATCGTTCAGTATATCGATGAAGTCTGGTCCTCTGCTCCTTCCATCCTTCCCTCTGATCCTTACGATCGCGCCATGGCTCGATTTTGGGCCGCCTTTGTCGACGACAAGCTTTTCACACCCATGAAAGCGACTCTGGCTGCAGAAGGGGAAGCGAAACAGGGGCTTATCGATCAAGCCGTCGAAGCTATAGGTTTATTGGAGGAAGCTTTTGGAAAGCTGAGCAAAGGGAAGGGGTTCTTCGGCGGAGACCATATTGGGTTTGTTGATATTTCTTTTGGTTCGTTTTTGGGATGGCTTAAAGTGATTGAAATATCAAATGGGGTGAAATTTATAGACGGAGTGAAGACTCCAGGCCTGGCCGGATGGGCTGAGAAATTCTCTGCAGACGGCGCTGTGAAAGATTTGTTGCCGGACACTGAGAAGCTTCTGGAGTTTGCTAAGGTTCTTGAAGCCACAATGAAAGGAGGTCCTCGTCCTTCCAATTAG | 699 | 47.07 | MAKHQDVKLLGLWSSPFVMRARIALNIKSVNYEFLEETFGSKSQLLLQSNPVHKKIPVLIHHNNPIAESLIIVQYIDEVWSSAPSILPSDPYDRAMARFWAAFVDDKLFTPMKATLAAEGEAKQGLIDQAVEAIGLLEEAFGKLSKGKGFFGGDHIGFVDISFGSFLGWLKVIEISNGVKFIDGVKTPGLAGWAEKFSADGAVKDLLPDTEKLLEFAKVLEATMKGGPRPSN | 232 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 10624661 | 10625833 | - | Tan0012324.1 | Tan04g1142 | 749546 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan04g1142 | 232 | SUPERFAMILY | GST C-terminal domain-like | 78 | 220 | IPR036282 | - | |
Tan04g1142 | 232 | CDD | GST_C_Tau | 91 | 220 | IPR045074 | GO:0004364(InterPro)|GO:0006749(InterPro) | |
Tan04g1142 | 232 | Gene3D | Glutaredoxin | 1 | 86 | - | - | |
Tan04g1142 | 232 | Pfam | Glutathione S-transferase, N-terminal domain | 6 | 78 | IPR004045 | - | |
Tan04g1142 | 232 | Gene3D | - | 87 | 229 | - | - | |
Tan04g1142 | 232 | FunFam | Glutathione S-transferase GSTU6 | 2 | 87 | - | - | |
Tan04g1142 | 232 | CDD | GST_N_Tau | 7 | 80 | - | - | |
Tan04g1142 | 232 | SUPERFAMILY | Thioredoxin-like | 6 | 109 | IPR036249 | - | |
Tan04g1142 | 232 | Pfam | Glutathione S-transferase, C-terminal domain | 122 | 194 | - | - | |
Tan04g1142 | 232 | PANTHER | GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING | 6 | 218 | IPR045073 | GO:0004364(PANTHER)|GO:0005737(PANTHER)|GO:0006749(PANTHER) | |
Tan04g1142 | 232 | FunFam | Glutathione S-transferase U9 | 87 | 226 | - | - | |
Tan04g1142 | 232 | SFLD | Main (cytGST) | 3 | 225 | - | - | |
Tan04g1142 | 232 | ProSiteProfiles | Soluble glutathione S-transferase C-terminal domain profile. | 90 | 216 | IPR010987 | - | |
Tan04g1142 | 232 | SFLD | Main.3: Omega- and Tau-like | 3 | 225 | IPR045073 | - | |
Tan04g1142 | 232 | ProSiteProfiles | Soluble glutathione S-transferase N-terminal domain profile. | 5 | 84 | IPR004045 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan04g1142 | Tan-Chr4:10624661 | Tan10g0407 | Tan-Chr10:3273542 | 6.60E-45 | dispersed | |
Tan04g1142 | Tan-Chr4:10624661 | Tan04g1143 | Tan-Chr4:10637086 | 5.60E-113 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan04g1142 | K00799 | - | mdm:139193209 | 310.842 |