Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan04g1143 ATGGCAAAAAATCAGGACGTGAGGCTTCTGGGTTCGTGGGCTAGTCCATTTGTGATGAGGGTCAGAATCGCCCTCAATATCAAATCTATAGACTACGAGTTTCTTCAGGAAACATTCGGATCCAAAAGCCAGCTCCTTCTCCAATCCAACCCTGTTCATAAGAAAATCCCTGTTCTCATTCACCACAATAACCCCATCGCCGAATCCTTAATCATCGTTCAGTATATCGATGAAGTCTGGTCCTCTGCTCCTTCCATCCTTCCCTCTGATCCTTACGACCGCGCCATGGCTCGATTTTGGGCTGCCTTTGCCGACGACAAGCTTTTCACACCAATGAGAGCGACTCTGGGTGCAGAAGAGGAAGTGAAAAAGGGGCTTATCGATCAAGTGAAAGAAGCGATGGGCCAATTAGAGGAAGCCTTTGGGAAGTTGAGCAAAGGGAAGGGGTTCTTCGGCGGAGACCATATTGGATTTCTTGATATTGCATTTGGGTCGTTCTTGGGTTGGCTTAGAGTGGCTGAAATATCAAATGGGGTGAAATTGATCGACGGAGTGAAGACTCCAGGGCTGGCTGGATGGGCTGAGAGATTCTCTGAAGACGACGCTGTGAAAGATGTGTTGCCTGAAACTGAGAAGCTTCTGGAGTTTGCTAAGGCTATTGAAGCCAAAATGAAAGGAGGGCCTCCCCCGTAG 693 48.34 MAKNQDVRLLGSWASPFVMRVRIALNIKSIDYEFLQETFGSKSQLLLQSNPVHKKIPVLIHHNNPIAESLIIVQYIDEVWSSAPSILPSDPYDRAMARFWAAFADDKLFTPMRATLGAEEEVKKGLIDQVKEAMGQLEEAFGKLSKGKGFFGGDHIGFLDIAFGSFLGWLRVAEISNGVKLIDGVKTPGLAGWAERFSEDDAVKDVLPETEKLLEFAKAIEAKMKGGPPP 230
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 10637086 10638172 - Tan0010095.1 Tan04g1143 749547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan04g1143 230 Gene3D Glutaredoxin 1 86 - -
Tan04g1143 230 Pfam Glutathione S-transferase, N-terminal domain 7 78 IPR004045 -
Tan04g1143 230 SUPERFAMILY GST C-terminal domain-like 78 221 IPR036282 -
Tan04g1143 230 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 6 218 IPR045073 GO:0004364(PANTHER)|GO:0005737(PANTHER)|GO:0006749(PANTHER)
Tan04g1143 230 CDD GST_C_Tau 91 220 IPR045074 GO:0004364(InterPro)|GO:0006749(InterPro)
Tan04g1143 230 FunFam Glutathione S-transferase GSTU6 2 87 - -
Tan04g1143 230 SFLD Glutathione Transferase (cytosolic) 3 225 IPR040079 -
Tan04g1143 230 CDD GST_N_Tau 7 80 - -
Tan04g1143 230 SUPERFAMILY Thioredoxin-like 6 109 IPR036249 -
Tan04g1143 230 Gene3D - 87 229 - -
Tan04g1143 230 Pfam Glutathione S-transferase, C-terminal domain 124 196 - -
Tan04g1143 230 SFLD Main.3: Omega- and Tau-like 3 225 IPR045073 -
Tan04g1143 230 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 5 84 IPR004045 -
Tan04g1143 230 FunFam Glutathione S-transferase U9 87 226 - -
Tan04g1143 230 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 90 220 IPR010987 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan04g1143 Tan-Chr4:10637086 Tan10g0407 Tan-Chr10:3273542 9.40E-44 dispersed
Tan04g1142 Tan-Chr4:10624661 Tan04g1143 Tan-Chr4:10637086 5.60E-113 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan04g1143 K00799 - mdm:139193209 311.612