Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Tan04g1152 ATGAGTGGATGGGATAGGGTTAGACCATCGAGTTCGAGATTTGGCCGCGACAATTCTGCAATGCATGAGAGGACCTCCTCTACTACCACGGTTCGACTCGGCCGAGTCCAGCCGCAGGCTCCTGGACATCGCACCATCTTCTGCAACGATCGCGACGCTAATCTCCTTGTTAAATTCAAGGGGAATTCAGTTTCGACGACTAAGTACAACTTCTTCACTTTCTTTCCGAAAGGGCTGTTTGAACAGTTCAGGCGCGTGGCTAACCTATACTTTCTTACAATCTCTATCTTATCCACTACACCCATCAGTCCCGTGCATCCAATTACAAATGTGGTCCCTTTAAGTCTGGTTCTACTCGTCTCTCTCATTAAAGAAGCATTTGAGGACTGGAAACGATTCCAGAATGATATGGCAATTAATAATAATCTTGTAGATGTGCTACAAGATCAAAAGTGGGAGAGCGTTCCTTGGAAAAGGTTGCAGGTTGGGGACATTGTTAGGGTTCGGCAAGATGGATTTTTTCCTGCAGATCTTCTTTTCCTTGCGAGTACAAATCCAGATGGTGTTTGCTACATTGAGACTGCTAACCTGGACGGGGAGACAAATTTGAAGATTAGAAAGGCCCTGGAAAAGACCTGGGATTACCTGACTCCAGAGAAGGCATCTGAATTTAAAGGTGAAGTACAATGCGAGCAACCAAACAATTCACTCTACACTTTCACCGGCAATGTTATTATTCAGAAGCAAACATTACCTCTCAGCCCAAACCAACTTTTATTGCGAGGATGCAGTCTCAGGAACACTGAATATATTGTTGGGGCTGTTATTTTTACAGGTCATGAAACAAAGGTTATGATGAATGCTATGAATGTTCCCTCCAAAAGAAGCACTCTGGAGAAAAAACTTGACAAACTTATACTCGCACTTTTTGCTACTCTCTTTATCATGTGTTTGATTGGAGCAATTGGCAGTGGCGTGTTTGTAAATCAAAAGTACTACTACTTGGCTCTTGATAAGGGAGGGGAAAACCAATTTAACCCTCGCAACCGATTCCTGGTTGTCATTCTGACCATGTTTACCCTGATTACTCTGTACTCGACCATCATTCCTATTTCTCTTTATGTTTCCATTGAGATGATCAAATTTATTCAATCGACACAATATATCAATAAGGATCTAAATATGTTCCATGCTGATAGCAATACCCCTGCATTGGCTAGAACTTCCAATCTGAACGAAGAACTTGGACAGGTAGAGTACATCTTTTCAGATAAAACTGGTACTCTTACCAGGAATCTAATGGAGTTCTTTAAGTGTTCAATCGGTGGAGAGATTTATGGCACTGGTATCACTGAAATAGAGAGGGGAATTGCTGAGCAGAATGGCTTGAAAGTGGAAGAGGAACACAAATCCAATGCTGTACAAGAAAAGGGATTTAATTTTGATGATGCTAGGCTTATGAGAGGAGCATGGAGAAATGAGCCCAACTCTGATCTTTGTAAGGAATTTTTCAGATGCCTTGCTATTTGCCATACTGTACTCCCTGAGGGCGATGAATCCCCTGAAAAGATCACATATCAAGCAGCATCACCTGATGAGGCTGCCTTGGTAACTGCTGCTAAAAACTTTGGCTTCTTCTTTTACAGGCGTACACCTACTACAATATATGTTCGGGAATCTCATGTTGAGAAGATGGGTAAAATCCTAGATGTTTCTTATGAAATTCTCAATGTACTTGAGTTCAATAGTGTAAGGAAGCGTCAGTCTGTGGTGTGTCGTTATTCCGATGGTAGGCTTGTCTTGTACTGCAAGGGTGCTGATACTGTAATATATGAGAGATTGGCTGGTGGAAATGAAGATCTGAAGAACGTAAGTAGGGAACACTTGGAGAAATTTGGATCTTCCGGTTTGAGAACCCTATGCCTTGCTTATAGAGATTTGCATCCTGACGTGTATGAAAGCTGGAATGAGAAATTCATTCAAGCGAAGTCTTCCTTAAGAGATCGTGAAAAGAAATTGGATGAGGTAGCAGAACTTATAGAGAAAGACCTTATTTTGATTGGTTGTACTGCTATAGAAGATAAGCTTCAAGAAGGAGTACCAAACTGTATACAGACACTTTCTAGAGCTGGTATCAAGATTTGGGTGCTAACGGGAGACAAGATGGAAACTGCTATTAATATTGCTTATGCTTGCAATTTAATAAACAATGAAATGAAACAATTTATTATCAGTTCAGAAACCGATGCAATCAGAGAAGTTGAAAACAGGGGCGACCAAGTAGAACTTGCACGTTTTACTAGAGAAGAAGTAAAGAAGGAATTGAAGAAATGTCTTGAGGAAGCGCAGCAGTGTTTACAATCTGTGTCTCCACCAAAATTAGCTCTTGTTATAGATGGAAAATGTTTGATGTATGCGTTAGATCCAAGTCTGCGAGTTACTTTACTAAATTTGAGCTTGAATTGTAGTTCGGTTGTTTGCTGCCGAGTTTCTCCTTTGCAGAAAGCGCAGGTGACAAGTCTGGTGAAGAAAGGTGCACAGAAAATAACACTTAGTATTGGTGATGGTGCTAATGATGTTAGCATGATTCAAGCAGCTCATGTGGGCATTGGAATAAGTGGGCAGGAGGGAATGCAAGCAGTGATGGCTAGTGATTTTGCTATTGCCCAGTTTCGCTTTCTCACAGATTTACTTCTCGTGCATGGGCGATGGTCATATCTTAGAATATGCAAGGTTGTCACATACTTCTTTTACAAGAATCTTACGTTCACTTTAACTCAGTTTTGGTTCACCTTTCAAACTGGATTTTCTGGTCAAAGATTCTATGATGATTGGTTCCAGTCATTGTATAATGTCATATTTACCGCCCTACCTGTAATAATTGTCGGACTATTTGACAAGGTACTGCATTCTTTCCTACTATTTTGCTCATGGTCATGGCATGTAATGCTTTGCTATTGA 2961 40.9 MSGWDRVRPSSSRFGRDNSAMHERTSSTTTVRLGRVQPQAPGHRTIFCNDRDANLLVKFKGNSVSTTKYNFFTFFPKGLFEQFRRVANLYFLTISILSTTPISPVHPITNVVPLSLVLLVSLIKEAFEDWKRFQNDMAINNNLVDVLQDQKWESVPWKRLQVGDIVRVRQDGFFPADLLFLASTNPDGVCYIETANLDGETNLKIRKALEKTWDYLTPEKASEFKGEVQCEQPNNSLYTFTGNVIIQKQTLPLSPNQLLLRGCSLRNTEYIVGAVIFTGHETKVMMNAMNVPSKRSTLEKKLDKLILALFATLFIMCLIGAIGSGVFVNQKYYYLALDKGGENQFNPRNRFLVVILTMFTLITLYSTIIPISLYVSIEMIKFIQSTQYINKDLNMFHADSNTPALARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGGEIYGTGITEIERGIAEQNGLKVEEEHKSNAVQEKGFNFDDARLMRGAWRNEPNSDLCKEFFRCLAICHTVLPEGDESPEKITYQAASPDEAALVTAAKNFGFFFYRRTPTTIYVRESHVEKMGKILDVSYEILNVLEFNSVRKRQSVVCRYSDGRLVLYCKGADTVIYERLAGGNEDLKNVSREHLEKFGSSGLRTLCLAYRDLHPDVYESWNEKFIQAKSSLRDREKKLDEVAELIEKDLILIGCTAIEDKLQEGVPNCIQTLSRAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIISSETDAIREVENRGDQVELARFTREEVKKELKKCLEEAQQCLQSVSPPKLALVIDGKCLMYALDPSLRVTLLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGAQKITLSIGDGANDVSMIQAAHVGIGISGQEGMQAVMASDFAIAQFRFLTDLLLVHGRWSYLRICKVVTYFFYKNLTFTLTQFWFTFQTGFSGQRFYDDWFQSLYNVIFTALPVIIVGLFDKVLHSFLLFCSWSWHVMLCY 986
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
4 10788420 10802436 + Tan0021442.2 Tan04g1152 749556
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Tan04g1152 986 FunFam Phospholipid-transporting ATPase 686 893 - -
Tan04g1152 986 Gene3D - 124 289 - -
Tan04g1152 986 SUPERFAMILY HAD-like 410 896 IPR036412 -
Tan04g1152 986 Pfam Cation transport ATPase (P-type) 517 614 - -
Tan04g1152 986 FunFam Phospholipid-transporting ATPase IC 419 431 - -
Tan04g1152 986 ProSitePatterns E1-E2 ATPases phosphorylation site. 424 430 IPR018303 -
Tan04g1152 986 Coils Coil 768 788 - -
Tan04g1152 986 CDD P-type_ATPase_APLT_Dnf-like 61 967 - -
Tan04g1152 986 FunFam Phospholipid-transporting ATPase 530 685 - -
Tan04g1152 986 Pfam E1-E2 ATPase 143 322 - -
Tan04g1152 986 SFLD Haloacid Dehalogenase 404 904 - -
Tan04g1152 986 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 30 970 - GO:0005802(PANTHER)|GO:0005886(PANTHER)|GO:0045332(PANTHER)|GO:0048194(PANTHER)|GO:0140326(PANTHER)
Tan04g1152 986 MobiDBLite consensus disorder prediction 1 31 - -
Tan04g1152 986 NCBIfam phospholipid-translocating P-type ATPase 59 970 IPR006539 GO:0000287(InterPro)|GO:0005524(InterPro)|GO:0015914(InterPro)|GO:0016020(InterPro)|GO:0140326(InterPro)
Tan04g1152 986 Gene3D - 532 686 IPR023299 GO:0000166(InterPro)
Tan04g1152 986 Pfam Phospholipid-translocating ATPase N-terminal 46 110 IPR032631 -
Tan04g1152 986 Pfam Phospholipid-translocating P-type ATPase C-terminal 881 970 IPR032630 -
Tan04g1152 986 SUPERFAMILY Calcium ATPase, transduction domain A 141 285 IPR008250 -
Tan04g1152 986 MobiDBLite consensus disorder prediction 13 31 - -
Tan04g1152 986 FunFam Phospholipid-transporting ATPase 120 289 - -
Tan04g1152 986 SFLD p-type atpase 404 904 IPR044492 -
Tan04g1152 986 Gene3D - 687 893 IPR023214 -
Tan04g1152 986 NCBIfam HAD-IC family P-type ATPase 826 932 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Tan04g1152 986 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 429 692 IPR023299 GO:0000166(InterPro)
Tan04g1152 986 PRINTS P-type cation-transporting ATPase superfamily signature 422 436 - -
Tan04g1152 986 PRINTS P-type cation-transporting ATPase superfamily signature 853 872 - -
Tan04g1152 986 SUPERFAMILY Calcium ATPase, transmembrane domain M 54 974 IPR023298 -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan04g1152 Tan-Chr4:10788420 Tan11g2053 Tan-Chr11:43586445 3.40E-260 dispersed
Tan04g1151 Tan-Chr4:10788420 Tan04g1152 Tan-Chr4:10788420 0.00E+00 tandem
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan04g1152 K14802 - csv:101207069 1822.75