Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan04g1167 ATGGCTTTGCTGCTTCAGCTTCGGCTTCAGCCATGGCTTCTTCATCTCTTCTTTCTTTTCCTCTCTGTTTCCCCTGTTTGTTATTGCCAAGGTACTCCCCCTCAAAATATCGAAACCTCCTATCCTATCACAATTTTTTCTCCACCGCCGTTCACACCTAACTACCCGCCGTCGCCGTCGCCGTCGACTTCGACGAGGACCATTGTGACGGCGGTGGCTGTCACTGCAGTGGGTATGGCTCTGATTTCCACGTTGTTCTTTTTCTTAATCCAGAGATATCTGATCAGAAGAAAACGGAAAACAGAGGAGGCGAATTCGGGTACGGGTCAGGGTCCGGTGTCGCAGCCGGCGGTTGCTCAGAGTGAATTTTCGCGTCTTGATGGGAATCTTAAGGGGTTTATTGTGGATGAAGATGGGTTGGATGTGATTTATTGGAAGAGACTTGAAAAAAGGAAATCCAAGAATAGCTTTGATCGGGGTGATGGAGAAGGAAATGTTAAAGGAAATCGAAGCAAGAAGTCAGAGCTTGTTCAAGAAATTCCTCTCCTTCGAGGAAAATCTTCGAGTTCACATGTTAAAATTGCACCGGAAGCTGAAGAACCCCGTCGGATTACTCCTCCGCCCCCTCCGCCGCCGCCCCAGACTAACCACCCTCCGCCATTTACTGGGAATTCTGTTCAGGCAGTTGGAAAACCATCAACAGTGCAACCGCAGCCGGCAGCAATTCAAGTACCTCCGTCACAATCTCTCATGGCTGTTCCTAACAATAAGAGCTCTGTTCCGCCACCGCCACCGCCCATTCCAGCCAAGACCACTTCAAGACCACCGCCGCCGCCACCTCCCATTCCAGCCAAGACCAATTCAAGACCACCGCCACCGCCTCCAATTCCAGCCAAGACCAATTCAGCAGCCCCACCTCCCCCTCCAATACCGGCCAAGGCAAATCCGGCAGCACCACCGCCGCCGCCCAAGGCCGGCAGTTCCAAATTGCCGTTGCGGCCTGCACCTCCAAAAGAGGGTAAATTCTCTGCAGAATCTTCTTCATCAGCGGACAATGATCAGGTTAAAATGAAGCCTCTGCATTGGGATAAAGTGAACACCGCAAATGCCGATCATTCCATGGTTTGGGACAAAATGCACGCCGGTTCTTTCAAATTTGATGGGGATCTTATGGAAGCTCTGTTTGGATATGTCGCAACCAATCGGAAATCCCCCCGGAGTGAGGCTAATTCTTCAGCAAACGCCGTTGGACGGAATTCAGGGCCATCGCAGACTTTCATTCTTGAACCCAAAAAATCGCAGAACATAGCCATTGTAGTCAAGTCCTTGACCATTCCTCGCAACGAAATCCTCGATGCGCTCAACGAAGGTCAAGGCCTCGAAACAGAGATTCTTGAAAAACTCACAAGAATTGCTCTGACCCAAGAGGAAATTTCTCAAATTCTTGCATACAAAGGAGACCCCCAGAAGCTGGCTGATGCTGAAACTTTCCTTTACCATCTTCTCAAATCGGTTCCATCTGCCTTTACACGCCTCAACGCCATGCTTTTCCGATTGAATTTCAGCTCTGAGATTCTCCATCTTAAGGAATCTCTAGAAACTCTGGAATCGGCCTGCAAGGAGCTTAGAACAAGAGGGCTGTTTTTGAAACTGCTTGAAGCAATACTCAAAGCTGGGAATCGGCTGAATGCGGGAACTGCAAGAGGAAATGCCAGAGCTTTCAACCTTACATCTCTTCGGAAGCTCTCTGATGTTAGAAGCACTGATGGGAAAACCACTTTGCTCCACTTTGTGGTGCAAGAAGTCATCAGGGCAGAAGGGAAAAGATGTGTTTTAAACAGGAACAAGAGCTTGAGCCGTAACACTAGCCATGCCAGCGACAGCAGCTTTAGTAGCTCCGAAAATTCGACTTCGAAAGAGGGCAGAGTAAATGAATACATGATGTTGGGATTGCCAGTGGTGGGAGGTCTGAGCGCTGAGTTCTCTAGTGTAAAGAAAGCGGCAACAATCGACTACGAGAGCTTCGCCAATACCGGGTCATCTCTGACCAGCCGAACAGCAGAAATCCGGCAGCTTTTAACTCAAATTGGGAACAATGGAGGTGGGTTTGGGAAAGAAATGGGAGGGTTTCTTGAGACAGCAGAGGAAGAGCTGAAGGTGGTGAGAGAAGAACAGACGAAGGTGATGGAGCTAGTGATGAAGACAACAGAGTATTATCAGGCTGGAAGTTCAAAAGATAAAGAAGCAAATAGGCTTCAATTATTCATCATAGTTAAAGATTTTCTAGAAATGGTAGATCGGGTGTGTGTTGAAATTGCTCGAAATCTCCAGAGGAGAAGATCATCGACAGTAAATTTGGGCTCGTCGCCGGTGAGATCGAAGGCCATCTTCCCCAACTTGCCGGAAAATTTTATGTCAGACAAGTCCAGAGGCAGTTCTAGTGATTCAGATGATGAATTCTGA 2463 48.36 MALLLQLRLQPWLLHLFFLFLSVSPVCYCQGTPPQNIETSYPITIFSPPPFTPNYPPSPSPSTSTRTIVTAVAVTAVGMALISTLFFFLIQRYLIRRKRKTEEANSGTGQGPVSQPAVAQSEFSRLDGNLKGFIVDEDGLDVIYWKRLEKRKSKNSFDRGDGEGNVKGNRSKKSELVQEIPLLRGKSSSSHVKIAPEAEEPRRITPPPPPPPPQTNHPPPFTGNSVQAVGKPSTVQPQPAAIQVPPSQSLMAVPNNKSSVPPPPPPIPAKTTSRPPPPPPPIPAKTNSRPPPPPPIPAKTNSAAPPPPPIPAKANPAAPPPPPKAGSSKLPLRPAPPKEGKFSAESSSSADNDQVKMKPLHWDKVNTANADHSMVWDKMHAGSFKFDGDLMEALFGYVATNRKSPRSEANSSANAVGRNSGPSQTFILEPKKSQNIAIVVKSLTIPRNEILDALNEGQGLETEILEKLTRIALTQEEISQILAYKGDPQKLADAETFLYHLLKSVPSAFTRLNAMLFRLNFSSEILHLKESLETLESACKELRTRGLFLKLLEAILKAGNRLNAGTARGNARAFNLTSLRKLSDVRSTDGKTTLLHFVVQEVIRAEGKRCVLNRNKSLSRNTSHASDSSFSSSENSTSKEGRVNEYMMLGLPVVGGLSAEFSSVKKAATIDYESFANTGSSLTSRTAEIRQLLTQIGNNGGGFGKEMGGFLETAEEELKVVREEQTKVMELVMKTTEYYQAGSSKDKEANRLQLFIIVKDFLEMVDRVCVEIARNLQRRRSSTVNLGSSPVRSKAIFPNLPENFMSDKSRGSSSDSDDEF 820
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 10916302 10918844 - Tan0006702.1 Tan04g1167 749571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan04g1167 820 MobiDBLite consensus disorder prediction 154 179 - -
Tan04g1167 820 SUPERFAMILY Formin homology 2 domain (FH2 domain) 423 780 - -
Tan04g1167 820 Coils Coil 525 545 - -
Tan04g1167 820 MobiDBLite consensus disorder prediction 402 424 - -
Tan04g1167 820 MobiDBLite consensus disorder prediction 220 256 - -
Tan04g1167 820 Pfam Formin Homology 2 Domain 350 765 IPR015425 -
Tan04g1167 820 MobiDBLite consensus disorder prediction 154 356 - -
Tan04g1167 820 MobiDBLite consensus disorder prediction 618 641 - -
Tan04g1167 820 ProSiteProfiles Formin homology-2 (FH2) domain profile. 347 791 IPR015425 -
Tan04g1167 820 Coils Coil 711 731 - -
Tan04g1167 820 MobiDBLite consensus disorder prediction 257 330 - -
Tan04g1167 820 Gene3D Formin, FH2 domain 367 785 IPR042201 -
Tan04g1167 820 PANTHER FORMIN-RELATED 40 819 IPR027643 GO:0003779(InterPro)|GO:0030036(InterPro)|GO:0045010(InterPro)|GO:0051015(InterPro)
Tan04g1167 820 MobiDBLite consensus disorder prediction 201 219 - -
Tan04g1167 820 SMART it6_source 347 780 IPR015425 -
Tan04g1167 820 MobiDBLite consensus disorder prediction 403 424 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g2820 Tan-Chr1:56899514 Tan04g1167 Tan-Chr4:10916302 1.00E-117 dispersed
Tan04g1167 Tan-Chr4:10916302 Tan09g0197 Tan-Chr9:10673567 7.40E-83 dispersed
Tan04g1167 Tan-Chr4:10916302 Tan01g4501 Tan-Chr1:110637190 3.40E-80 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan04g1167 K28090 - csv:101208197 1034.25