Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan04g1212 | ATGACATCAAGATCCACCACAAACTTTTTGGACCTGGCTTCTGGAGATTTACTGGATGTTCCTCGTACACCTAGGCCCCTGCCACGGGTAATGACTGTTCCTGGAATTATTTCCGAAATGGACGATTATGGGAGCAATGACGGAGATTCGGAATCTTCATCTGTATGCCGTGAGCGGAAAATCATAGTTGCAAATATGTTGCCCTTGCAAGCTAAAAAAGATGGGCAATCTGGCAAATGGTGCTTCAGTTCAGACGAGGATTCAATTTTATTGCAGCTAAAGAATGGATTTTCACCAGAGATAGAGGTTATATACGTGGGTTCCCTCAAGGTTGAAATCGACGCCAGCGAACAAGAAGAGGTTGCTCAGAAACTGTTCGACAATTTTAACTGTGTACCTACATTTCTACCTTATGATCTCCAGAAGAAATTTTATCTTGGGTTCTGCAAACAGCAGATATGGCCCTTATTCCATTACATGCTACCCATGTGCCCAGAGCACGGTGATCGCTTCGATCGGCTGCTTTGGCAAGCCTATGTTTCTGCAAATAAAATATTTGCTGACAAGGTGATGGAAATCATCAATCCTGAAGAAGATTCTGTTTGGGTTCATGATTATCATTTAATGGTTCTTCCAACGTTTCTGAGGAAGCGCTACAATCGAGTTAAACTTGGATTTTTCCTGCATAGCCCCTTTCCATCATCAGAAATCTATCGAACTTTACCAGTTCGGGATGAGATTCTCCGTGGCCTGCTAAACTGTGATTTAGTTGGTTTTCATACGTTTGATTATGCTCGTCACTTCCTCTCATGCTGCAGCAGAATGTTGGGCCTGGACTATGAATCTAAGCGGGGACATATTGGATTAGATTACTATGGCCGCACGGTATATATCAAAATTCTGCCCGTAGGCATTCACATGGGTCGATTGGAATCAGTGATGAATCTTCCATCTACATCCGCTAAAGTCAGAGAAATTCGAGATCAGTTCATGGGAAAGAAATTAATTCTTGGTATTGATGACATGGACATTTTTAAGGGCATAAGCCTGAAGCTTCTTGCCGTTGAACAGCTTTTACGGCAACGTCCTGAGTTGCGAGGCAAAATAGTCCTGGTTCAAATAGTGAACCCTGCAAGGGGTTCAGGGAAAGATGTACATGAAGCTCAGAAGGAAACCTACTTGGCTGCTGAAAGGATCAATGAAGCTTATGGTTCAAATGACTACAAACCTGTAATTCTGATTGATCGCCCCGTTCCACGTTTTGAGAAGACTGCTTATTATGCATTAGCAGAATGCTGCATAGTGAGTGCTGTAAGGGATGGCATGAATTTGGTTCCATACAAGTATATTGTTTGTAGGCAAGGAACTCCTCTTATGGATGGGGCTATGGGCTTACAAGTTGGTTCTCCTCGAACGAGTATGCTTGTAGTGTCCGAGTTTATTGGTTGCTCGCCTTCTTTAAGTGGAGCCATCAGGGTTAACCCTTGGGACATTGATGCTGTTGCCGATGCCTTGGAATTGGCCATAACCATGCAGGAGTCAGAGAAGCAGTTGCGGCATGAGAAACATTATCGATATGTCAGTTCCCATGATATAGGATACTGGTCTCGAAGTTTTATGCAGGATTTAGAGAGAGCATGTCAAGATCACTATAGTAAACGGTGCTGGGGAATTGGCTTGGGTCTGCGTTTTAGAGTTGTTTCTCTTTCTCCAGGATTTAGGAAGTTAACAATCGATCACATTGTCTCAGCTTATAAAAGAACGCATAGAAGAGCGATATTTTTGGATTACGACGGCACTATTATTTCACAAAGCTCTATAATTAAGACACCGAGCCCTGAAGTTATCTCCGTCTTGACTACGCTTTGCAATGACCCCTGTAACACTGTGTTCATTGTTAGTGGGAGGGGGAGAAGTTCTTTAGGTGAATGGTTTGCCTCTTGTGAGATGTTGGGGATTGCAGCAGAGCATGGGCACTTTATAAGGTGGGGTGGAACTTCAGAGTGGGAAACCAGTTCGTTGTCTTCTGATCTGGATTGGATTAAAATTGTAGAGCCAGTGATGAGATTATATACAGAAGCAACTGATGGGTCGTGCATAGAACGGAAAGAGAGTGCTTTAGTTTGGCATCATCAAGATGCTGATTCTGACTTCGGATCCTGTCAAGCTAAGGAATTGCTGGACCATCTAGAAAACGTACTTGCCAATGACCCAGCAGTCGTTAAAAGGGGCCAACATATAGTTGAAGTGAAGCCACAGGTATTCTTGTTTTATTGTCCGGTTCTATCTTTATCTATCTTATCAAATAGTATACCTCCAGTGTAA | 2325 | 43.01 | MTSRSTTNFLDLASGDLLDVPRTPRPLPRVMTVPGIISEMDDYGSNDGDSESSSVCRERKIIVANMLPLQAKKDGQSGKWCFSSDEDSILLQLKNGFSPEIEVIYVGSLKVEIDASEQEEVAQKLFDNFNCVPTFLPYDLQKKFYLGFCKQQIWPLFHYMLPMCPEHGDRFDRLLWQAYVSANKIFADKVMEIINPEEDSVWVHDYHLMVLPTFLRKRYNRVKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNCDLVGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYYGRTVYIKILPVGIHMGRLESVMNLPSTSAKVREIRDQFMGKKLILGIDDMDIFKGISLKLLAVEQLLRQRPELRGKIVLVQIVNPARGSGKDVHEAQKETYLAAERINEAYGSNDYKPVILIDRPVPRFEKTAYYALAECCIVSAVRDGMNLVPYKYIVCRQGTPLMDGAMGLQVGSPRTSMLVVSEFIGCSPSLSGAIRVNPWDIDAVADALELAITMQESEKQLRHEKHYRYVSSHDIGYWSRSFMQDLERACQDHYSKRCWGIGLGLRFRVVSLSPGFRKLTIDHIVSAYKRTHRRAIFLDYDGTIISQSSIIKTPSPEVISVLTTLCNDPCNTVFIVSGRGRSSLGEWFASCEMLGIAAEHGHFIRWGGTSEWETSSLSSDLDWIKIVEPVMRLYTEATDGSCIERKESALVWHHQDADSDFGSCQAKELLDHLENVLANDPAVVKRGQHIVEVKPQVFLFYCPVLSLSILSNSIPPV | 774 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 11273588 | 11279454 | - | Tan0014557.4 | Tan04g1212 | 749616 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan04g1212 | 774 | CDD | GT20_TPS | 59 | 544 | IPR001830 | GO:0003824(InterPro)|GO:0005992(InterPro) | |
Tan04g1212 | 774 | SUPERFAMILY | HAD-like | 591 | 753 | IPR036412 | - | |
Tan04g1212 | 774 | Gene3D | Glycogen Phosphorylase B; | 312 | 528 | - | - | |
Tan04g1212 | 774 | PANTHER | TREHALOSE-6-PHOSPHATE SYNTHASE | 26 | 753 | IPR001830 | GO:0003824(InterPro)|GO:0004805(PANTHER)|GO:0005829(PANTHER)|GO:0005992(InterPro)|GO:0005992(PANTHER)|GO:0070413(PANTHER) | |
Tan04g1212 | 774 | FunFam | alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 | 52 | 311 | - | - | |
Tan04g1212 | 774 | FunFam | Trehalose-6-phosphate synthase 2 | 674 | 753 | - | - | |
Tan04g1212 | 774 | Gene3D | - | 673 | 753 | - | - | |
Tan04g1212 | 774 | Pfam | Glycosyltransferase family 20 | 59 | 544 | IPR001830 | GO:0003824(InterPro)|GO:0005992(InterPro) | |
Tan04g1212 | 774 | SUPERFAMILY | UDP-Glycosyltransferase/glycogen phosphorylase | 59 | 548 | - | - | |
Tan04g1212 | 774 | FunFam | alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 | 590 | 707 | - | - | |
Tan04g1212 | 774 | NCBIfam | HAD-IIB family hydrolase | 592 | 732 | IPR006379 | - | |
Tan04g1212 | 774 | Gene3D | Glycogen Phosphorylase B; | 52 | 311 | - | - | |
Tan04g1212 | 774 | Pfam | Trehalose-phosphatase | 594 | 754 | IPR003337 | GO:0005992(InterPro) | |
Tan04g1212 | 774 | FunFam | Alpha,alpha-trehalose-phosphate synthase | 313 | 528 | - | - | |
Tan04g1212 | 774 | Gene3D | - | 593 | 672 | IPR023214 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan04g1210 | Tan-Chr4:11273588 | Tan04g1212 | Tan-Chr4:11273588 | 0.00E+00 | dispersed | |
Tan04g1212 | Tan-Chr4:11273588 | Tan09g2228 | Tan-Chr9:72247966 | 0.00E+00 | dispersed | |
Tan04g1211 | Tan-Chr4:11273588 | Tan04g1212 | Tan-Chr4:11273588 | 0.00E+00 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan04g1212 | K16055 | - | csv:101212688 | 1471.83 |