Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan04g1213 ATGGATCTGGAAAGTGGGGTTGTTAGTGAAAAGAATGCCAAGAAAGATTCATGGAAGACGGTTTTGATGATGGCTTATCAGAGCCTTGGGGTTGTCTATGGCGAGTTGGGCACTTCGCCGCTATATGTCTATAGGAACACTTTTGCAGAAGAAGATATCGGTCACTCGAAGAGCAACGATGAGATTTATGGGGTTTTGTCCTTTGTTTTCTGGACTCTCACCATTGTTCCTTTGCTCAAGTACATATTTATCGTCCTTAAAGCCGATGATAATGGCGAGGGAGGGACATTTGCTCTGTATTCGTTACTGTGTCGACATGCCCGAGTTAGCTCATTGCCGAACACCCAGTTGGCTGATTCTGAACTCACCGAGTACAAGACGGATGTCCTTGGTCCGCCATCTCAAGAAAGTTTTGGATTCAAACTCAAATCCGCCTTGGAAAAGCGTCGGGTTCTGCAAAAATTCTTGCTCGTTCTTGCTTTAATTGGGACTTGCATGGTAATAGGAGATGGCATCTTAACGCCGGCTATTTCTGTTCTTTCGGCGGTTTCTGGCCTCGAGCATACCATGGCAAAAGAGCATCACCAATATATAATAATCCCAATTTCATGCATCGTACTGATAGGCTTGTTTGCTCTTCAACACTACGGCACGCACAGAATTGGCTTCTTATTTGCTCCAATAGTGACACTGTGGCTATTCTGTATCAGTGCCATTGGCTTGTACAATATTATTCACTGGAATCCGGGTGTTTATAGAGCAATTTCTCCTCGTTACATGTTTCAATTTCTTAAGAAAACACAAAAAGGAGGTTGGATGTCACTTGGTGGAATTATGTTGTGCATTACTGGTTCAGAGGCAATGTTTGCTGACCTTGGGCATTTTTCACAGTTGTCAATTAAGATTGCTTTCTCTTTTATGGTTTATCCGTCTCTCCTCCTAGCATACATGGGGCAAGCTGCCTATCTTTCTCAAAATTATACCACTCCAAATGACCGCCGAATTGGGTTTTATGTATCTGTACCTGAGAAATTGAGGTGGCCTGTCCTTATAATTGCTGTGCTTGCTGCGGTAGTAGGAAGCCAGGCTATAATCACCGGAACTTTCTCGATTATAAAGCAGTGCTCTGCTTTGGGATGCTTTCCCCGAGTCAAAATTGTCCATACATCCTCGAAAGTTCACGGTCAGATCTATATTCCAGAGATTAATTGGATTTTGATGCTGCTGTGCTTGGCTGTTACAATAGGTTTCAGAGACACTAAGCGCTTGGGTCATGCCTCAGGTTTGGCAGTGATCACTGTCATGCTCGTAACCACGTGCTTAATGTCTCTCGTTATCGTCCTGTGCTGGCACCGAAGTGTATTTCTTGCCATAGGCTTCATCTTCTTCTTTGGCACAATTGAATCTCTCTACTTCTCAGCTTCTCTTATCAAATTTCTTGAAGGAGCTTGGGTTCCCATCGCAATTTCTGTTGTATTCATGATCGTTATGTATGTATGGCACTATGGTACTCTTAAGAAGTTTGAGTTTGACATCCAAAACAAGGTTTCTATTAAATGGCTACTTAGTTTCGGTCCCAGCCTAGGCATCGTAAGAGTCCGTGGGATTGGTGTCATACAGACGGAGCTTGTTTCGGGAATCCCGGGTATCTTCACCCACTTTGTCACCAATATTCCTGCCTTCCATCAAGTTCTTGTTTTCCTTTGCATCAAATATGTCCCGGTGCCACATGTTAGACCAGCGGAACGGTTTCTAATTGGTCGTATTGGTACGAGTGAATATAGACTCTATAGGTGCATTGTGCGATATGGGTATCGAGATGTTCACAAAGACGATGTAGAGTTTGAGAATGATCTTATATGCAGCATAGCAGAGTTTATAAGGTCAGGGAGTGCAGAGTCTAGTGATTCTACACAGGGCTTCGACAAAGATGGTGAAAAGATGACAGTCGTCGGGACATCCCATGAAGATAGAATTCAGATGGCGGAGACCGATATCAACGAAAACTCTGAAGAACTGTACAGAGCTTCAGATACAAGGGAAATAAGGTCACCAGCTCCAGTTAGAAAAAGAGTACGTTTCATCGTACCTGAGAGCCAGAAAATTGACACCGATACAAGGGCAGAACTACGAGAACTAATGGAAGCAAGGGAAGGAGGAGTAGCTTACATATTAGGACGGTCACACATGAAAGCAAAACAAGGATCGAGCACGCTGAAAAGAGTGTTGATCGACTTCATTTACGAGTTCTTGAGGAAGAACAGCAGAGAAGCTAACTATCCTATAGGTTTATCACACTCATCAACAGCTCTTGAGGTGGGTATGATGTATCTTGTTTAG 2340 43.46 MDLESGVVSEKNAKKDSWKTVLMMAYQSLGVVYGELGTSPLYVYRNTFAEEDIGHSKSNDEIYGVLSFVFWTLTIVPLLKYIFIVLKADDNGEGGTFALYSLLCRHARVSSLPNTQLADSELTEYKTDVLGPPSQESFGFKLKSALEKRRVLQKFLLVLALIGTCMVIGDGILTPAISVLSAVSGLEHTMAKEHHQYIIIPISCIVLIGLFALQHYGTHRIGFLFAPIVTLWLFCISAIGLYNIIHWNPGVYRAISPRYMFQFLKKTQKGGWMSLGGIMLCITGSEAMFADLGHFSQLSIKIAFSFMVYPSLLLAYMGQAAYLSQNYTTPNDRRIGFYVSVPEKLRWPVLIIAVLAAVVGSQAIITGTFSIIKQCSALGCFPRVKIVHTSSKVHGQIYIPEINWILMLLCLAVTIGFRDTKRLGHASGLAVITVMLVTTCLMSLVIVLCWHRSVFLAIGFIFFFGTIESLYFSASLIKFLEGAWVPIAISVVFMIVMYVWHYGTLKKFEFDIQNKVSIKWLLSFGPSLGIVRVRGIGVIQTELVSGIPGIFTHFVTNIPAFHQVLVFLCIKYVPVPHVRPAERFLIGRIGTSEYRLYRCIVRYGYRDVHKDDVEFENDLICSIAEFIRSGSAESSDSTQGFDKDGEKMTVVGTSHEDRIQMAETDINENSEELYRASDTREIRSPAPVRKRVRFIVPESQKIDTDTRAELRELMEAREGGVAYILGRSHMKAKQGSSTLKRVLIDFIYEFLRKNSREANYPIGLSHSSTALEVGMMYLV 779
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 11348551 11355014 - Tan0015426.1 Tan04g1213 749617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan04g1213 779 Pfam K+ potassium transporter integral membrane domain 25 522 IPR053951 -
Tan04g1213 779 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 13 778 IPR003855 GO:0006813(PANTHER)|GO:0015079(InterPro)|GO:0015079(PANTHER)|GO:0016020(PANTHER)|GO:0016020(InterPro)|GO:0071805(InterPro)
Tan04g1213 779 Pfam K+ potassium transporter C-terminal domain 535 775 IPR053952 -
Tan04g1213 779 NCBIfam potassium uptake protein 24 777 IPR003855 GO:0015079(InterPro)|GO:0016020(InterPro)|GO:0071805(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan04g1213 Tan-Chr4:11348551 Tan11g0608 Tan-Chr11:5393187 5.2e-314 dispersed
Tan04g1213 Tan-Chr4:11348551 Tan07g1332 Tan-Chr7:62505389 0.00E+00 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan04g1213 K03549 - csv:101212925 1405.19