Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan04g1233 ATGGGTGGGGCCGGCGTGAAGGAGAAGTCAGATAATTTTGGAACGTTGACGTTGAATGGAGCCGATGGTCCTGAACCGTCGAATTTTGAATCGCAAATTAAAGTTCCGCCTGCCGACGTCGAAGGTTCACCGTCTTCTTCACCGCCACTTACTCCAAACCTTGGATCTACATCGCCGGCCCCTACTGGTTCGTCCAATTCAAGTTCGTCCGACGAGAATCCATCGCCACCGCCTGAAGCTTCCTCTTTACCACCGCCGTCTCCTCATCCTCCTCCCCCTCCGACTCCATCACCACCGCCTCCACAACTGCCGTCTCAGACTGGCATTGTCAATCCTCCACCTTCCCCTGTTCCGGCCAAAAAGAACTCTCCGACACCTCCGGGAAGTCCACCTTCACCAAAACCCGAGAATAATCCCTCTGTTCCCGCAAATAACGGCGCCGCTCCGGGACCTAATTCAGCCAAGGAACTTCCACCTTCGGAACCGACGGATCCTCTTCCTCCAACAGAAAATCCAGGCGTGATTCCTTCACCAGGTGCAAATCCGGGGACGGCGAAACGAACTCCGAATTCACCTCCAGGAACAAATACTCCAACATCAGAGTCTAACATTCTTCCACCTCCCACAACCACAACCACAACTACAACCACATCCAATCGTACTCCAAACAACTCACCTCATTCCACCGACTCAACGCCAGTTAAATCACCATTAGGGCAGTCCAAAGTACCATCGTCAGGTTCAAGTAGCCACTCAGATGTTGCAGTAGGCGCTGCAGTAGCTGGAGTTTTTGTAATCATTTTGGTTGCTGTGCTTTTTGTGTTCACAAGGAAGAAGAAAAGAAGGGGAGATATATATACTGGTCCATACTTGCCTCCTAATAACTTCTGTGTGAAATCAGATGGAAATTACTATGCGCATCAACATATGGGAAACTCTGGTTCGGCAGAAGGTTTCTATACTCAGGTCCCGCATACTCCTGTTGGAAATAGCTTTGGGAGTCAAAAAGGAACAGGATACAGTGGCAGTGGAATGGAGTCAGGCGTGATAAACAGTGCTAAATTCTTCTTTAGCTATGAGGAGTTGATGGAGATTACGTCTGGATTTTCGCGTCAAAACATTCTTGGGGAAGGTGGATTTGGATGTGTTTACCAGGGTTGGCTTCCAGAAGGGAAGTCAGTGGCTGTGAAGCAACTCAAGGCTGGAAGTGGACAGGGGGAGAGGGAATTCAAGGCGGAAGTTGAGATTATCAGTCGTGTTCATCATCGGCATTTGGTGTCTTTAGTGGGCTACTGCGTCTCTGAGCATCATAGATTGCTCATCTATGAGTTTGTTCCCAATAAGACTCTTGAGCATCATCTCCATAGCGGTAATGGAGTTCCCGTCTTGGATTGGTCCAAAAGACTCAAAATCGCTTTAGGATCTGCAAAGGGTTTGGCGTATCTGCATGAAGATTGCCATCCCAGAATTATTCACAGAGACATCAAGTCAGCCAACATTTTGCTGGATGATGCTTTTGAGGCGCAGGTTGCAGATTTTGGACTTGCGAAACTGACAAACGATACACACACCCACGTTTCGACTCGTGTCATGGGGACATTTGGCTACATGGCGCCCGAGTACGCATCAAGTGGGAAATTGACAGACAGATCAGATGTTTTCTCGTTTGGGGTCGTGCTTCTTGAGCTAATCACCGGTCGTAAGCCTGTTGATCCCACTCAGCCTTTGGGAGACGAGAGTTTGGTCGAATGGGCTCGTCCACTCCTCCTTCACGCCCTTGAAACTGGAGAGTTTGAAGGATTAATAGATCCACGCCTTGAAAAACGTTATGTGGAAAGTGAAATGTTCAGAATGATCGAAGCAGCAGCTGCCTGCGTTCGTCATTCGGCTCCCAAAAGGCCTCGCATGGTTCAGGTGGTGAGAGCACTAGACATTGAAAGTGACATGTCTGACCTCACTAATGGTGTCAAATATGGCCAGAGCACTATTTATGATTCTGGGCAATACAGTCAAGACATTTCTAAATTCAGGAGAATGGCGCTCGGTGATAGCTCCGAGTACGACATTTACAGTAGCGAATACAATTCCAGAGAAATGACTGGAAGTCGTGAATCATGGAGATTCCAAAATAACTCAAGTGGTGAATCAGAAACTCAAGCTTTTAAGGGACGAAGTGGCGTACCACACGATCACCATAGCGGTCGACAATTCTAA 2214 48.24 MGGAGVKEKSDNFGTLTLNGADGPEPSNFESQIKVPPADVEGSPSSSPPLTPNLGSTSPAPTGSSNSSSSDENPSPPPEASSLPPPSPHPPPPPTPSPPPPQLPSQTGIVNPPPSPVPAKKNSPTPPGSPPSPKPENNPSVPANNGAAPGPNSAKELPPSEPTDPLPPTENPGVIPSPGANPGTAKRTPNSPPGTNTPTSESNILPPPTTTTTTTTTSNRTPNNSPHSTDSTPVKSPLGQSKVPSSGSSSHSDVAVGAAVAGVFVIILVAVLFVFTRKKKRRGDIYTGPYLPPNNFCVKSDGNYYAHQHMGNSGSAEGFYTQVPHTPVGNSFGSQKGTGYSGSGMESGVINSAKFFFSYEELMEITSGFSRQNILGEGGFGCVYQGWLPEGKSVAVKQLKAGSGQGEREFKAEVEIISRVHHRHLVSLVGYCVSEHHRLLIYEFVPNKTLEHHLHSGNGVPVLDWSKRLKIALGSAKGLAYLHEDCHPRIIHRDIKSANILLDDAFEAQVADFGLAKLTNDTHTHVSTRVMGTFGYMAPEYASSGKLTDRSDVFSFGVVLLELITGRKPVDPTQPLGDESLVEWARPLLLHALETGEFEGLIDPRLEKRYVESEMFRMIEAAAACVRHSAPKRPRMVQVVRALDIESDMSDLTNGVKYGQSTIYDSGQYSQDISKFRRMALGDSSEYDIYSSEYNSREMTGSRESWRFQNNSSGESETQAFKGRSGVPHDHHSGRQF 737
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 11752923 11756533 + Tan0020033.1 Tan04g1233 749637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan04g1233 737 MobiDBLite consensus disorder prediction 700 720 - -
Tan04g1233 737 MobiDBLite consensus disorder prediction 44 76 - -
Tan04g1233 737 MobiDBLite consensus disorder prediction 183 252 - -
Tan04g1233 737 MobiDBLite consensus disorder prediction 77 138 - -
Tan04g1233 737 MobiDBLite consensus disorder prediction 1 252 - -
Tan04g1233 737 MobiDBLite consensus disorder prediction 12 26 - -
Tan04g1233 737 Pfam Protein tyrosine and serine/threonine kinase 372 642 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan04g1233 737 FunFam proline-rich receptor-like protein kinase PERK8 445 658 - -
Tan04g1233 737 Gene3D Phosphorylase Kinase; domain 1 338 444 - -
Tan04g1233 737 CDD STKc_IRAK 375 644 - -
Tan04g1233 737 ProSitePatterns Serine/Threonine protein kinases active-site signature. 490 502 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan04g1233 737 ProSiteProfiles Protein kinase domain profile. 369 649 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan04g1233 737 Gene3D Transferase(Phosphotransferase) domain 1 445 660 - -
Tan04g1233 737 ProSitePatterns Protein kinases ATP-binding region signature. 375 397 IPR017441 GO:0005524(InterPro)
Tan04g1233 737 FunFam Proline-rich receptor-like protein kinase PERK8 341 444 - -
Tan04g1233 737 SUPERFAMILY Protein kinase-like (PK-like) 349 643 IPR011009 -
Tan04g1233 737 MobiDBLite consensus disorder prediction 155 175 - -
Tan04g1233 737 MobiDBLite consensus disorder prediction 700 737 - -
Tan04g1233 737 SMART serkin_6 369 619 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan04g1233 737 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 213 679 IPR047117 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan04g1233 Tan-Chr4:11752923 Tan08g0167 Tan-Chr8:1415873 2.00E-132 dispersed
Tan04g1233 Tan-Chr4:11752923 Tan11g0375 Tan-Chr11:3035853 3.80E-139 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67454 PF07714 PK_Tyr_Ser-Thr 2.20E-44 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan04g1233 - - - 0.0