Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan04g1269 ATGAAACCCTTATTTGCAATCGCATTCCTTCTGATTCTCTTGTTTCGTCTTCTAATTCAATCTGCGGCTGATCCAAGAGCCACTGAGGCAGCTCTCATATGTTCGAACAACACTGCTTCCCCGCCGGAGCGATCCACCTTCGTCACGAATTTCTTGGCGTCCATGGATGCGGTTACTCCTCTCATTGCTTCCCAGCGATTTGCTGACGTTGTGAATGGGACTGGAAATACGACTGTTTATGCTTTTGGCCAGTGTATGAATGATCTTTCTCAAACGGATTGTGATCTCTGTTTTGCGCAGATGAAAACTCAGATCCTGCGCTGTCTCCCCTTTCAGCTTGCTACTCGCGGGGGCAGACTCTTCTATGATGGCTGCTATGTTAGGTATGATTATTATAATTTCTTCAATGAATCTTTGAGTGCTGTGGACAGGGCTGTATGTGGGAAATCGGATTACAGTGGGAATCGAACCATTTTTAGTGATAATGCTATGAAATTGGCGAGGAATTTGAGTGTAGTCGCGCCCAAGAACGATGGGTTTGCTGTGGGATTGGTGAATTTTAGAAATGTGTCCGTCTATGGATTGGCTCAGTGTTGGAAATTTGTGAAAGGGGCTTCTTGCTCCAACTGTTTGGTTGATGCTGCTAAGGAAATAGGTGCCTGTCCTCCAAAAGCCGAAGGAAGGGTGCTAAATGCCGGCTGTTACTTCAGATATTCAACTGAACGATTTTACTTCAACAGCACGGCAACCGCCACCGGAGGAAATGGAAGGAACCGTCTGGCGATAATTTTGGCTTCAGTATCTGCTGCCGTGGCTGCTGCATTGATTTTTGCAACGGCTGTTTTCTGTGCCAGAAGGAAAGTAGTGAGGAAACGCAGAGAGAAAAAGCAACTCGGTCCTCTTATGGCTATTGTTAACAAGTCGAAGCTTAATTTTTCATACGAGACACTTGAGAGGGCCACAAATTACTTTGACCAATCCAATAAACTGGGACAAGGAGGTTCTGGTTCAGTTTATAAAGGAACTTTGTCGGATGGCAGAGTTGTAGCAATCAAGAGGCTTTTCTTCAATACAAGACAATGGGTGGATCATTTCTTTAATGAAGTAAATTTGATAAGTGGCATCCGACATAAAAATCTTGTTGGGCTGTTGGGATGCAGTATTACAGGCCCTGAAAGCCTCCTTGTTTACGAATATGTGCCAAATCAGAGCTTGCACGATTACCTTTTTGGTAACAACAAGAACGTCCAGCCGCTGAGTTGGCAATCCAGGTTTAAGATTGTCTTAGGCACAGCTGAAGGCTTGGCTTATCTTCATGAAGAGTCAAAGGTGAAAATAATTCATCGGGACATAAAATTAAGCAATATTTTGCTGGACAATGATTTCACTCCAAAGATTGCTGATTTTGGACTTGCTAGATTGCTTCCTGAAGATAAGACACACATTAGCACTGCAATTGCTGGCACACTTGGTTACATGGCTCCGGAATATGTAGTGCGCGGCAAGTTGTCTGAAAAGGCAGATGTGTATAGTTTTGGAGTATTTGCAATTGAAGTTATAACAGGAAGGAGGAATGGTCACTTCTATCAAGATTCAACGTCCATCTTACAAAGGGTATGGAACTTTTATGGAGAGGGAAGGCTATATGCAGCTGTTGATCCCATCCTTGCAGGTGATTATCCACGAGACGAAGCATCTCGATTGCTTCAAATAGGTCTAGTTTGTGTGCAAGCGTTTGCTGATCTAAGGCCTTCCATGTCCATGGTTGTGAAAATGCTTACAGCAAACTATGAGATTCCCCAGCCAAAACAGCCTCCATATCTTCATCCTTCAAGTGGAGACATAAAACCCCACAATTCTTCAGACTCATCCAATCCCTTTCTGTACTCGAATTCGCGACTTTCCCAAGCTAGCATGACTCAAAGTATCATCGATCCTAGATGA 1944 43.83 MKPLFAIAFLLILLFRLLIQSAADPRATEAALICSNNTASPPERSTFVTNFLASMDAVTPLIASQRFADVVNGTGNTTVYAFGQCMNDLSQTDCDLCFAQMKTQILRCLPFQLATRGGRLFYDGCYVRYDYYNFFNESLSAVDRAVCGKSDYSGNRTIFSDNAMKLARNLSVVAPKNDGFAVGLVNFRNVSVYGLAQCWKFVKGASCSNCLVDAAKEIGACPPKAEGRVLNAGCYFRYSTERFYFNSTATATGGNGRNRLAIILASVSAAVAAALIFATAVFCARRKVVRKRREKKQLGPLMAIVNKSKLNFSYETLERATNYFDQSNKLGQGGSGSVYKGTLSDGRVVAIKRLFFNTRQWVDHFFNEVNLISGIRHKNLVGLLGCSITGPESLLVYEYVPNQSLHDYLFGNNKNVQPLSWQSRFKIVLGTAEGLAYLHEESKVKIIHRDIKLSNILLDNDFTPKIADFGLARLLPEDKTHISTAIAGTLGYMAPEYVVRGKLSEKADVYSFGVFAIEVITGRRNGHFYQDSTSILQRVWNFYGEGRLYAAVDPILAGDYPRDEASRLLQIGLVCVQAFADLRPSMSMVVKMLTANYEIPQPKQPPYLHPSSGDIKPHNSSDSSNPFLYSNSRLSQASMTQSIIDPR 647
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 12200508 12204086 - Tan0006357.1 Tan04g1269 749673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan04g1269 647 ProSitePatterns Serine/Threonine protein kinases active-site signature. 446 458 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan04g1269 647 MobiDBLite consensus disorder prediction 603 629 - -
Tan04g1269 647 Pfam Protein kinase domain 325 524 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan04g1269 647 FunFam Cysteine-rich receptor-like protein kinase 2 290 399 - -
Tan04g1269 647 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 163 624 IPR052059 GO:0004674(PANTHER)|GO:0006468(PANTHER)
Tan04g1269 647 MobiDBLite consensus disorder prediction 614 629 - -
Tan04g1269 647 FunFam Cysteine-rich receptor-like protein kinase 3 143 243 - -
Tan04g1269 647 Gene3D - 141 243 IPR038408 -
Tan04g1269 647 Gene3D - 28 134 IPR038408 -
Tan04g1269 647 FunFam Cysteine-rich receptor-like protein kinase 2 400 601 - -
Tan04g1269 647 CDD STKc_IRAK 330 594 - -
Tan04g1269 647 Pfam Salt stress response/antifungal 147 240 IPR002902 -
Tan04g1269 647 Pfam Salt stress response/antifungal 34 131 IPR002902 -
Tan04g1269 647 ProSiteProfiles Gnk2-homologous domain profile. 29 134 IPR002902 -
Tan04g1269 647 FunFam Cysteine-rich receptor-like protein kinase 2 27 134 - -
Tan04g1269 647 Gene3D Transferase(Phosphotransferase) domain 1 400 604 - -
Tan04g1269 647 ProSiteProfiles Protein kinase domain profile. 324 608 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan04g1269 647 ProSiteProfiles Gnk2-homologous domain profile. 140 243 IPR002902 -
Tan04g1269 647 ProSitePatterns Protein kinases ATP-binding region signature. 330 352 IPR017441 GO:0005524(InterPro)
Tan04g1269 647 SMART serkin_6 324 608 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan04g1269 647 Gene3D Phosphorylase Kinase; domain 1 283 399 - -
Tan04g1269 647 SUPERFAMILY Protein kinase-like (PK-like) 310 626 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan04g1269 Tan-Chr4:12200508 Tan05g3144 Tan-Chr5:83459541 2.50E-86 dispersed
Tan06g2191 Tan-Chr6:72076077 Tan04g1269 Tan-Chr4:12200508 3.90E-13 transposed
Tan07g1380 Tan-Chr7:64349159 Tan04g1269 Tan-Chr4:12200508 8.40E-162 transposed
Tan09g0559 Tan-Chr9:49546920 Tan04g1269 Tan-Chr4:12200508 9.40E-48 transposed
Tan09g1760 Tan-Chr9:69133213 Tan04g1269 Tan-Chr4:12200508 1.50E-80 transposed
Tan02g2096 Tan-Chr2:90543981 Tan04g1269 Tan-Chr4:12200508 4.60E-135 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67455 PF00069 Pkinase 6.00E-44 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan04g1269 - - - 0.0