Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan04g1374 ATGGAAGCAGAAGATCTTCCAGAAGCAAGGGCAGCCCTCAGCCTCCTCCGCAGTAGACTCTGCAACTCTAGTTTCTATTTCAAGCCTCCATCCGATTCTTCTGATAACAATTACAGCAAATTGAAGTTTATAATATCCAGTTCGGTGGCTGAAGCGTGTAATAATTCGATCCTGCTTCTCGGCCCCCGGGGTTCAGGGAAAATGGCGGTGCTGGAACTCGTTCTGCAAGATCTATTACTAGAATATCCTGATATGATTTCCGTGATAAGGTTGAGTGGTCTTTTGCATTGCGACGACAATTCTGCTTTCAAGGAGATTGCTAGGCAGCTTTGCTCAGAGTATCAGTTATTGTTCTCAAAAATGGCATCCTTTGACGACAACTCCCAGTTTATGATAGCTATGCTACGGGAGTGTGGCTTGGCACATAAGACAATTGTTTTTATACTGGATGAGTTTGATCTTTTTGCACAAGGAAAACAACGGTTACTTTATAGTTTGTTAGATGCCATGCAATCAGTGTCATCACAAGCTGTTGTTATTGGCATCAGTTGTCGATTGGATGCTGATCAGCTACTTGAGAAAAGAGTAAGATCTCGTTTCTCCCATAGAAAGCTGTTATTTCTTCCTCCCTGCAAGGAAGATGTCGAGAGATTGTTGGAGCACATTTTATCATTGCCAATAGATTCGGACCTTCCTCATGACTACATTATTAAATTTAATGCAAAGCTTCGTAATATTTTAGCAGATGAGAGATTTAAAAAGATTATTAGCACTTATTTGGACTCTGATTCAACCGTCAAACAATTAGTGAGATATCTGTTTTGTGCCATATCAAAGATGGACTTGAAATCTGGGATGCTGACCCTTGAGAATTTTAAACATGCTCTTTCAAATATTCAGAGGCAGCCAAAGCAGGAATATATAAAAGATTGTTCCTTATTGGAGCTCTATATTCTGGTATGCATGAAAAGGTTGGAAGTGAAGGAGCAGAATTCGTACAACTTCAATTCTGTAATGAAAGAGTACAAGAATATTCATGATTCACTGCGGATGTCTGGTTATTATTCACGAAGTGTATGCTTACGGGTATCGTGGAGCCGAATAAAATTGTTTACATTTGGATTTTTCTAG 1131 39.61 MEAEDLPEARAALSLLRSRLCNSSFYFKPPSDSSDNNYSKLKFIISSSVAEACNNSILLLGPRGSGKMAVLELVLQDLLLEYPDMISVIRLSGLLHCDDNSAFKEIARQLCSEYQLLFSKMASFDDNSQFMIAMLRECGLAHKTIVFILDEFDLFAQGKQRLLYSLLDAMQSVSSQAVVIGISCRLDADQLLEKRVRSRFSHRKLLFLPPCKEDVERLLEHILSLPIDSDLPHDYIIKFNAKLRNILADERFKKIISTYLDSDSTVKQLVRYLFCAISKMDLKSGMLTLENFKHALSNIQRQPKQEYIKDCSLLELYILVCMKRLEVKEQNSYNFNSVMKEYKNIHDSLRMSGYYSRSVCLRVSWSRIKLFTFGFF 376
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 15107746 15115791 + Tan0019053.6 Tan04g1374 749778
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan04g1374 376 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 4 8 362 IPR016527 GO:0000808(InterPro)|GO:0003677(InterPro)|GO:0003688(PANTHER)|GO:0005634(InterPro)|GO:0005664(PANTHER)|GO:0006260(InterPro)|GO:0006270(PANTHER)
Tan04g1374 376 FunFam Origin of replication complex subunit 4 35 209 - -
Tan04g1374 376 PIRSF ORC4 4 372 IPR016527 GO:0000808(InterPro)|GO:0003677(InterPro)|GO:0005634(InterPro)|GO:0006260(InterPro)
Tan04g1374 376 Pfam Origin recognition complex (ORC) subunit 4 C-terminus 218 358 IPR032705 -
Tan04g1374 376 Gene3D - 34 209 IPR027417 -
Tan04g1374 376 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 41 300 IPR027417 -
Tan04g1374 376 Pfam AAA domain 55 181 IPR049945 GO:0016887(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan04g1373 Tan-Chr4:15107746 Tan04g1374 Tan-Chr4:15107746 2.80E-203 tandem
Tan04g1374 Tan-Chr4:15107746 Tan04g1375 Tan-Chr4:15107746 8.90E-177 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan04g1374 K02606 - csv:101220845 654.825