Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan04g1375 | ATGGAAGCAGAAGATCTTCCAGAAGCAAGGGCAGCCCTCAGCCTCCTCCGCAGTAGACTCTGCAACTCTAGTTTCTATTTCAAGCCTCCATCCGATTCTTCTGATAACAATTACAGCAAATTGAAGTTTATAATATCCAGTTCGGTGGCTGAAGCGTGTAATAATTCGATCCTGCTTCTCGGCCCCCGGGGTTCAGGGAAAATGGCGGTGCTGGAACTCGTTCTGCAAGATCTATTACTAGAATATCCTGATATGATTTCCGTGATAAGGTTGAGTGGTCTTTTGCATTGCGACGACAATTCTGCTTTCAAGGAGATTGCTAGGCAGCTTTGCTCAGAGTATCAGTTATTGTTCTCAAAAATGGGAAAACAACGGTTACTTTATAGTTTGTTAGATGCCATGCAATCAGTGTCATCACAAGCTGTTGTTATTGGCATCAGTTGTCGATTGGATGCTGATCAGCTACTTGAGAAAAGAGTAAGATCTCGTTTCTCCCATAGAAAGCTGTTATTTCTTCCTCCCTGCAAGGAAGATGTCGAGAGATTGTTGGAGCACATTTTATCATTGCCAATAGATTCGGACCTTCCTCATGACTACATTATTAAATTTAATGCAAAGCTTCGTAATATTTTAGCAGATGAGAGATTTAAAAAGATTATTAGCACTTATTTGGACTCTGATTCAACCGTCAAACAATTAGTGAGATATCTGTTTTGTGCCATATCAAAGATGGACTTGAAATCTGGGATGCTGACCCTTGAGAATTTTAAACATGCTCTTTCAAATATTCAGAGGCAGCCAAAGCAGGAATATATAAAAGATTGTTCCTTATTGGAGCTCTATATTCTGGTATGCATGAAAAGGTTGGAAGTGAAGGAGCAGAATTCGTACAACTTCAATTCTGTAATGAAAGAGTACAAGAATATTCATGATTCACTGCGGATGTCTGGTTATTATTCACGAAGTGTATGCTTACGGGCTTTTGAGCACCTTCTACAGCGAGAATTAATTTGTTTTGCTGATAACCGTGGGCATAATCAATCTGTTGAATTTCGACCAGTGAAGCTGTTAATATCATCTCATGAACTACATCATGGACTGAAATCTTATCATTCATGTCCTGCCATCCTTAAGAAATTAATGAATTGA | 1149 | 39.25 | MEAEDLPEARAALSLLRSRLCNSSFYFKPPSDSSDNNYSKLKFIISSSVAEACNNSILLLGPRGSGKMAVLELVLQDLLLEYPDMISVIRLSGLLHCDDNSAFKEIARQLCSEYQLLFSKMGKQRLLYSLLDAMQSVSSQAVVIGISCRLDADQLLEKRVRSRFSHRKLLFLPPCKEDVERLLEHILSLPIDSDLPHDYIIKFNAKLRNILADERFKKIISTYLDSDSTVKQLVRYLFCAISKMDLKSGMLTLENFKHALSNIQRQPKQEYIKDCSLLELYILVCMKRLEVKEQNSYNFNSVMKEYKNIHDSLRMSGYYSRSVCLRAFEHLLQRELICFADNRGHNQSVEFRPVKLLISSHELHHGLKSYHSCPAILKKLMN | 382 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 15107746 | 15115791 | + | Tan0019053.7 | Tan04g1375 | 749779 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan04g1375 | 382 | Gene3D | - | 34 | 116 | IPR027417 | - | |
Tan04g1375 | 382 | PIRSF | ORC4 | 113 | 382 | IPR016527 | GO:0000808(InterPro)|GO:0003677(InterPro)|GO:0005634(InterPro)|GO:0006260(InterPro) | |
Tan04g1375 | 382 | PIRSF | ORC4 | 6 | 123 | IPR016527 | GO:0000808(InterPro)|GO:0003677(InterPro)|GO:0005634(InterPro)|GO:0006260(InterPro) | |
Tan04g1375 | 382 | Gene3D | - | 117 | 173 | IPR027417 | - | |
Tan04g1375 | 382 | Pfam | Origin recognition complex (ORC) subunit 4 C-terminus | 182 | 366 | IPR032705 | - | |
Tan04g1375 | 382 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 41 | 264 | IPR027417 | - | |
Tan04g1375 | 382 | PANTHER | ORIGIN RECOGNITION COMPLEX SUBUNIT 4 | 117 | 381 | IPR016527 | GO:0000808(InterPro)|GO:0003677(InterPro)|GO:0003688(PANTHER)|GO:0005634(InterPro)|GO:0005664(PANTHER)|GO:0006260(InterPro)|GO:0006270(PANTHER) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan04g1372 | Tan-Chr4:15107746 | Tan04g1375 | Tan-Chr4:15107746 | 1.60E-172 | dispersed | |
Tan04g1373 | Tan-Chr4:15107746 | Tan04g1375 | Tan-Chr4:15107746 | 3.60E-211 | dispersed | |
Tan04g1374 | Tan-Chr4:15107746 | Tan04g1375 | Tan-Chr4:15107746 | 8.90E-177 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan04g1375 | K02606 | - | csv:101220845 | 670.618 |