Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan04g1384 ATGGATTTGCCTCTTTTTCGTTTCTTCAATTCTTTTTTTTCGTTTGCAACTTCCGTCATCTTCTCTGCCGCCCCTCAGCGAAATCTTCTCCCCGGCCATGGATTTGCCTTTCTCTTCACACCCTCTACTGGAATCAATGGCACGAGCTCGACTCAGAATTTGAGGCTTTTCAATTTCACCAATAATGGCGACCCCAATAATCATGTCTTCATTGTTGAGTTCGACTCGTTCCGAAATCAAGAGTTCAACGACACCAATGATAACCACGTGGGCGTAGATTTGAATTCTCTTATATCTACTGTTTCCTCTATAGTTGGGTTTTGGAGTGGACCAGATGATGGAGAATTCAAGGAGTTGAAGATTAACAATGGGGAAACTTATCAGGTTTGGATTGAATGTTTAAATTCTTTGGTTAATATTACAATGGCTGAAGTGGGAGAGAAAAGGCCTAGAAGGCCAATGATATCTCTGTCTATGTATGTAGGATTTACTGCAGCCACAGGGCAATTAGTTCAAAGCCATAAGATATTATCTTGGACTTTCAGTACCACTAACGTATCAATTGGTAATGCTTTAATCATAACGAATTTGCTCCTCAAAATGACTCCATTTTCTACTCAATAG 624 40.06 MDLPLFRFFNSFFSFATSVIFSAAPQRNLLPGHGFAFLFTPSTGINGTSSTQNLRLFNFTNNGDPNNHVFIVEFDSFRNQEFNDTNDNHVGVDLNSLISTVSSIVGFWSGPDDGEFKELKINNGETYQVWIECLNSLVNITMAEVGEKRPRRPMISLSMYVGFTAATGQLVQSHKILSWTFSTTNVSIGNALIITNLLLKMTPFSTQ 207
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 15315213 15315867 + Tan0021774.1 Tan04g1384 749788
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan04g1384 207 CDD lectin_legume_LecRK_Arcelin_ConA 17 184 IPR001220 GO:0030246(InterPro)
Tan04g1384 207 Gene3D - 3 191 - -
Tan04g1384 207 PANTHER CONCANAVALIN A-LIKE LECTIN FAMILY PROTEIN 12 186 IPR050258 -
Tan04g1384 207 Pfam Legume lectin domain 12 186 IPR001220 GO:0030246(InterPro)
Tan04g1384 207 SUPERFAMILY Concanavalin A-like lectins/glucanases 10 187 IPR013320 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan04g1384 Tan-Chr4:15315213 Tan05g3301 Tan-Chr5:84903016 2.50E-56 dispersed
Tan04g1384 Tan-Chr4:15315213 Tan02g0214 Tan-Chr2:1862226 1.60E-95 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan04g1384 - - - 0.0