Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan04g1444 | ATGGAAGCTCCTGGTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCAAATGGGGTTCTGAAAATGGCTATCAACCCCATGTTCTTGCTGTTGATGATAATCTTGTTGATCGTAAACTTGTGGAAAAGTTGCTCAAAAACTCCTCTTGTAAAGTAACAACTGCAGAAAATGGTCGCAGTGCTTTAGAGTTTCTGGGTTTGTTAGATGATCATCAACACAACAACTTAGAATGCACCACTAGGTCAAAAGTGAACTTAGTTATCACAGATTATTGCATGCCAGGAATGTCTGGATACGAACTTCTCAAGAAAATCAAGAGATCTTCGAGGATGAAGGAAGTTCCTGTAGTGATTGTATCATCGGAGAATGTGCCCACTCGCATCAACAAGTGTTTGGAGGAAGGAGCAGAAATGTTCATGCTGAAACCTTTGAAGCAATCTGATGTTGTGAAACTCAAGTGCCAGTTGATGAACTGA | 549 | 39.34 | MEAPGSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSKWGSENGYQPHVLAVDDNLVDRKLVEKLLKNSSCKVTTAENGRSALEFLGLLDDHQHNNLECTTRSKVNLVITDYCMPGMSGYELLKKIKRSSRMKEVPVVIVSSENVPTRINKCLEEGAEMFMLKPLKQSDVVKLKCQLMN | 182 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 16954915 | 16957854 | + | Tan0018015.1 | Tan04g1444 | 749848 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan04g1444 | 182 | SMART | REC_2 | 50 | 177 | IPR001789 | GO:0000160(InterPro) | |
Tan04g1444 | 182 | Gene3D | - | 46 | 182 | - | - | |
Tan04g1444 | 182 | Pfam | Response regulator receiver domain | 52 | 175 | IPR001789 | GO:0000160(InterPro) | |
Tan04g1444 | 182 | CDD | REC_typeA_ARR | 52 | 176 | - | - | |
Tan04g1444 | 182 | MobiDBLite | consensus disorder prediction | 1 | 44 | - | - | |
Tan04g1444 | 182 | ProSiteProfiles | Response regulatory domain profile. | 51 | 181 | IPR001789 | GO:0000160(InterPro) | |
Tan04g1444 | 182 | PANTHER | TWO-COMPONENT RESPONSE REGULATOR | 50 | 177 | IPR045279 | GO:0009736(InterPro) | |
Tan04g1444 | 182 | SUPERFAMILY | CheY-like | 50 | 176 | IPR011006 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan04g1444 | Tan-Chr4:16954915 | Tan08g1252 | Tan-Chr8:38118784 | 6.90E-42 | dispersed | |
Tan04g1444 | Tan-Chr4:16954915 | Tan09g2194 | Tan-Chr9:71968697 | 2.10E-38 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
27254 | PF00072 | Response_reg | 7.10E-22 | CL0304 | Tan | TR |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan04g1444 | K14492 | - | csv:101208898 | 253.447 |