Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tan04g1460 | ATGGAGGCGGTAATGGGTGGTTTTGTGTCGGTTTTTCCGGCGACGGTTGCGATTGCGGTGGCGTTGGTGGCGGTGTTTGTCCATTTGTACTATGGGGTGTTGAGGAGGACGGCGGAGGTGAGGAGGAAGCTGAGAGCGCAAGGAGTGACGGGGCCGCCGCCCTCGCCTCTGTACGGAAACTTGCCGGAGATGCAGAAGATCCAGTTGCAGGCGGCGGCCATGGCTTCGCCGCCGCACCATGCGTCGGCGATTGTCGCTCATGATTATACCTCCACTCTCTTCCCTTATTTCGTCAAGTGGAGGAAACAATACGGCCCATTATACACGTACTCGACAGGGAGGAGGCAGCATCTGTACGCAAACAAGGTGGATGTGGTGAAGGACTTAAGCCTCTCTAACAATCTCCACTTGGGCAAACCCTCCTACGTCACCAAGAAGCTCGCTCCGATTCTCGGCCACAGCGTCGTCAGATCGAACGGCGCCGTATGGGCTTTGCAGCGCAAGATCATCGCGCCGGAGTTCTTCATGGACCGGGTCCGGGCCATGGCGGTGCTCATGGCGGAGGCGGCGATGCCGTTGCTTCAGAAATGGGAGGGGAGGATCGGAGATGGAGAGGGAGAGGGAGCGACGGCGGAGATTGAGGTTGATGAGGATCTGAGAATATTCTCGGCGGATGTGATTTCTAGGGCTTGCTTTGGGAGCTGGTACGAGAAAGGGAACCACATTTTTTCCAAGCTTAGGGATCTTCAGAACTTGGTTTGCCACGGGAACTTTCTGTTTGGGAACATTTCCTTCAGTGACAGATTTTTTCAACCAAGCAAAGACAGAAGAATAAAGAAGCTGGAGAAGGAGATCGAGTCATTAATATGGGAGACTGTTCAACAGCGGCAACAAGAATGCTCCAAAACGTCGTCGTTGGAGAAGGATCTGTTGCAGCTGATAATGGAGGCTGCCATGAATGACCCAAGTGTAGGAGCTTGCAATGAGTCCTCCAAGAAGTTCATCGTCGACAACTGCAAGAGCATCTACTTCGCCGGCCATGAGTCCACCGCCGTCGCCGCCACCTGGTCCTTGATGCTCCTCGCCCTCCACCCCGAATGGCAAGATCGTATCCGGTCCGAGTTTGCTCAAGCTTGCCCCGACGGTCGCCCCGACACGGCGGTGATCTCTCAACTCAAATCGGTGAGTATGGTGGTCCAAGAAACGTTGCGATTGTACCCACCAGCGGCATTCGTGGCGAGGGAGACATTTGGCGAGACACAATTGGGGAACGTGCTGATTCCGAAGGGTGTCTGCATATGGACTTTGATTCCAACTTTACATAGAGAAGTTGAAATATGGGGAGAAAATGGGAATGAGTTCAAGCCAGAGCGGTTTGCCAACGGCATAGCCAAAGCGTGCAACTTCCCACAGGCCTACATGCCATTCGGGGCGGGCTCTCGACTATGCTTAGGGAAGAACTTTGCGTTGGTTCAGTTGAAAATCATTGTTTCTCTCATAGTTTCCAAGTTTAAGTTCACACTATCTCCTCATTATCACCATTCTCCTTCTTATAGAATGATTGTGGAGCCTTCCAATGGTGTGAAGATTGTCTTCCAAAGGCTTTGA | 1608 | 52.86 | MEAVMGGFVSVFPATVAIAVALVAVFVHLYYGVLRRTAEVRRKLRAQGVTGPPPSPLYGNLPEMQKIQLQAAAMASPPHHASAIVAHDYTSTLFPYFVKWRKQYGPLYTYSTGRRQHLYANKVDVVKDLSLSNNLHLGKPSYVTKKLAPILGHSVVRSNGAVWALQRKIIAPEFFMDRVRAMAVLMAEAAMPLLQKWEGRIGDGEGEGATAEIEVDEDLRIFSADVISRACFGSWYEKGNHIFSKLRDLQNLVCHGNFLFGNISFSDRFFQPSKDRRIKKLEKEIESLIWETVQQRQQECSKTSSLEKDLLQLIMEAAMNDPSVGACNESSKKFIVDNCKSIYFAGHESTAVAATWSLMLLALHPEWQDRIRSEFAQACPDGRPDTAVISQLKSVSMVVQETLRLYPPAAFVARETFGETQLGNVLIPKGVCIWTLIPTLHREVEIWGENGNEFKPERFANGIAKACNFPQAYMPFGAGSRLCLGKNFALVQLKIIVSLIVSKFKFTLSPHYHHSPSYRMIVEPSNGVKIVFQRL | 535 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 4 | 17701233 | 17707854 | - | Tan0003497.1 | Tan04g1460 | 749864 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tan04g1460 | 535 | Coils | Coil | 278 | 298 | - | - | |
| Tan04g1460 | 535 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 476 | 485 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Tan04g1460 | 535 | PRINTS | P450 superfamily signature | 483 | 494 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan04g1460 | 535 | PRINTS | P450 superfamily signature | 397 | 408 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan04g1460 | 535 | PRINTS | P450 superfamily signature | 474 | 483 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan04g1460 | 535 | PRINTS | P450 superfamily signature | 345 | 362 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan04g1460 | 535 | PRINTS | E-class P450 group I signature | 222 | 240 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan04g1460 | 535 | PRINTS | E-class P450 group I signature | 101 | 120 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan04g1460 | 535 | PRINTS | E-class P450 group I signature | 473 | 483 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan04g1460 | 535 | PRINTS | E-class P450 group I signature | 334 | 351 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan04g1460 | 535 | PRINTS | E-class P450 group I signature | 483 | 506 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan04g1460 | 535 | PRINTS | E-class P450 group I signature | 354 | 380 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan04g1460 | 535 | PANTHER | CYTOCHROME P450 FAMILY MEMBER | 25 | 527 | IPR050665 | GO:0004497(PANTHER) | |
| Tan04g1460 | 535 | SUPERFAMILY | Cytochrome P450 | 52 | 533 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan04g1460 | 535 | Gene3D | Cytochrome P450 | 35 | 535 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan04g1460 | 535 | Pfam | Cytochrome P450 | 92 | 529 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Tan04g1460 | Tan-Chr4:17701233 | Tan11g0347 | Tan-Chr11:2802230 | 9.70E-84 | dispersed | |
| Tan04g1460 | Tan-Chr4:17701233 | Tan01g0246 | Tan-Chr1:2102845 | 5.00E-80 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tan04g1460 | K20661 | - | csv:101216582 | 854.358 |