Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan04g1479 | ATGGTTTCAAGGTCGTATTCCAATTTGCTCGAACTCGCCACCGGAGAATCGCCGTCTTTCGGCCGTATAAACCGCCAAATCCCTCGGATTATGACCGTCGCCGGCTTAATCTCCGACATCGACGACGACCCATCGGAGAGCGTCTCCTCGGAGCCGTCCTCCTCCTCCGCCCCCCGCGACCGGATTATCATCGTCGCCAATGAGCTCCCCATCAGAGCCCACCGGAAAACAGGCAGCGGCGGAGCCACCGCCGGCTGGACTTTCAGCTGGGATGAAAATTCCCTTCTCCTCCAGCTGAAAGATGGGCTGGGAGATGATGATTTTGAGGTGTTTTATGTGGGTTGTCTCAAGGAAGATATTCATCCAAACGAACAAGATGAAGTCTCTCAAATACTTTTAGAGACTTTCAAATGTGTCCCAACATTTCTCACTCAAGAACTCTACACTAGGTACTACCATGGCTTCTGCAAGCAGCAGCTATGGCCTCTGTTTCATTACATGTTACCTCTTTCGCCTGACCTCGGTGGTCGATTCAATCGGTCGCTGTGGCAGGCTTATGTTTCTGTGAACAAGATCTTTGCTGATAGGATCATGGAAGTGATCAATCCTGAGGATGACTTTGTTTGGATTCATGATTATCATCTCATGGTGTTGCCTACTTTTTTGAGGAAGAGATTCAATAGGGTCAAGCTTGGATTCTTTTTGCATAGTCCGTTCCCATCGTCCGAGATATATCGGACGCTCCCAATCCGGGAGGAGCTCTTGCGAGCCCTCCTGAATTCGGATTTGATAGGGTTTCATACTTTTGATTATGCTAGGCATTTTCTATCTTGTTGTAGTCGAATGCTTGGTCTAACTTATGAGTCGAAACGGGGGTATATTGGGCTAGAGTATTATGGTCGAACCATTAGTATTAAGATCCTTCCTGTTGGGATTCATATGGGTCAGCTTCAATCTGTTTTGAGCCTTCAGAAGACTGAGGAGAAGGTCAGTGAACTTATCAAGCAGTTTCGCGATCGGGATAGGATAATGTTGCTTGGTGTCGACGATATGGATATATTTAAGGGGATAAGTTTGAAGCTTTTGGCTATGGAACAGTTGTTGATCACACACCCCGAGTGGCAGGGGAAAGTAGTATTGGTGCAGATTGCCAATCCTGCAAGAGGACGAGGGAAAGATGTGAAGGAAGTTCAGGATGAGACGAAGGCAACTGTTAAGCGGATTAACGATGTTTTTGGGAGACCTGGGTATGAGCCAGTTGTGTTGATTGAGGAACCACTCAAATTCTATGAGAGAGTTGCATATTATACAGTCGCCGAATGTTGTTTGGTCACTGCGGTTCGGGACGGTATGAATCTCATTCCATATGAGTACATTGTCAGTCGTCAAGGGAATGATAAGTTGGATAAACTCTTGGGGTGGGAATCATCAGCCCCAAAGAAGAGTATGTTGGTTATATCCGAGTTTATTGGGTGCTCTCCATCCTTGAGCGGAGCAATTCGAGTTAATCCCTGGAATATTGATGTTGTAGCTGATGCAATGGAATGTGCATTGGAGATGGAAGATGCGGAGAAGCAACTCCGCCATGAGAAGCATTTTAGATATGTGAGCACGCATGATGTCGGGTATTGGGCTCGGAGTTTCCTACAAGATTTGGAGAGGACTTGTAGGGATCATGTGAGGCAGAGATGTTGGGGTATTGGGTTTGGTTTAAGTTTTCGAGTCGTGGCTCTTGATCCGAACTTCAGGAAGCTCGCAATGGAACACATAATTTCGACTTATAAGAGAACGAAATCTCGGGCAATTCTTTTGGACTACGATGGTACATTAATGCCTCAAGCTTTGATTGACAAGAGTCCTACTTCGAAATGCCTCGAAACTCTTAATACCTTATGTCGGGATAAGAACAATATGGTGTTCATTGTGAGTGCAAAAAGTCGTAAGACGCTTGATGAATGGTTTGCGCCTTGCGAAAATCTCGGCATTGCTGCTGAGCACGGATACTTTATTAGGTTAAAGCAGGATGAAGAATGGGAAAGCAGTTTGCCAGTTGCAGATTGCTGTTGGAAGCAGATTGTGCAGCCAGTGATGAAACTCTACACTGAAACAACTGATGGATCGACAATCGAAGATCGAGAAACTGCGCTCGGATGGTGTTATGAAGATGCAGATCCGGATTTCGGTTCGTGTCAGGCTAAGGAGCTCTTCGATCATCTCGAAAGTGTCCTAGCCAACGAACCAGTTACTGTCAAAAGTGGTCAAAACATTGTGGAAGTTAAACCACAGGGCGTCAGCAAGGGTCTTGTAGCAAAACGACTTCTCTCCGTGATGCAAGAGAAGGGGACCCCTGTAGATTTTGTTCTCTGCATTGGCGACGACAGATCAGATGAAGACATGTTCAAGGTGATCGCAAGTTCCATGGCAGGTCCATCGATCGCACCTCGAGCCGAAATTTTTGCTTGTACAGTAGGGAAGAAACCAAGCAAAGCCAAGTATTACCTCGACGATCCATCAGAAATTGCGAGGTTGATGCATGGTTTGGCTTCGGTGTCGAGGCAGAACGTCCTGCTTTATCCGTCCCAAAGCTGA | 2589 | 46.47 | MVSRSYSNLLELATGESPSFGRINRQIPRIMTVAGLISDIDDDPSESVSSEPSSSSAPRDRIIIVANELPIRAHRKTGSGGATAGWTFSWDENSLLLQLKDGLGDDDFEVFYVGCLKEDIHPNEQDEVSQILLETFKCVPTFLTQELYTRYYHGFCKQQLWPLFHYMLPLSPDLGGRFNRSLWQAYVSVNKIFADRIMEVINPEDDFVWIHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPIREELLRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGLEYYGRTISIKILPVGIHMGQLQSVLSLQKTEEKVSELIKQFRDRDRIMLLGVDDMDIFKGISLKLLAMEQLLITHPEWQGKVVLVQIANPARGRGKDVKEVQDETKATVKRINDVFGRPGYEPVVLIEEPLKFYERVAYYTVAECCLVTAVRDGMNLIPYEYIVSRQGNDKLDKLLGWESSAPKKSMLVISEFIGCSPSLSGAIRVNPWNIDVVADAMECALEMEDAEKQLRHEKHFRYVSTHDVGYWARSFLQDLERTCRDHVRQRCWGIGFGLSFRVVALDPNFRKLAMEHIISTYKRTKSRAILLDYDGTLMPQALIDKSPTSKCLETLNTLCRDKNNMVFIVSAKSRKTLDEWFAPCENLGIAAEHGYFIRLKQDEEWESSLPVADCCWKQIVQPVMKLYTETTDGSTIEDRETALGWCYEDADPDFGSCQAKELFDHLESVLANEPVTVKSGQNIVEVKPQGVSKGLVAKRLLSVMQEKGTPVDFVLCIGDDRSDEDMFKVIASSMAGPSIAPRAEIFACTVGKKPSKAKYYLDDPSEIARLMHGLASVSRQNVLLYPSQS | 862 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 18882171 | 18885972 | - | Tan0016358.1 | Tan04g1479 | 749883 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan04g1479 | 862 | Gene3D | Glycogen Phosphorylase B; | 54 | 319 | - | - | |
Tan04g1479 | 862 | FunFam | Alpha,alpha-trehalose-phosphate synthase | 320 | 537 | - | - | |
Tan04g1479 | 862 | SUPERFAMILY | HAD-like | 600 | 845 | IPR036412 | - | |
Tan04g1479 | 862 | Pfam | Trehalose-phosphatase | 603 | 838 | IPR003337 | GO:0005992(InterPro) | |
Tan04g1479 | 862 | Gene3D | - | 599 | 715 | IPR023214 | - | |
Tan04g1479 | 862 | Gene3D | - | 729 | 856 | IPR023214 | - | |
Tan04g1479 | 862 | CDD | HAD_TPP | 601 | 839 | - | - | |
Tan04g1479 | 862 | FunFam | Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 | 729 | 857 | - | - | |
Tan04g1479 | 862 | FunFam | alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 | 54 | 318 | - | - | |
Tan04g1479 | 862 | FunFam | Trehalose-6-phosphate synthase 2 | 683 | 762 | - | - | |
Tan04g1479 | 862 | SUPERFAMILY | UDP-Glycosyltransferase/glycogen phosphorylase | 60 | 556 | - | - | |
Tan04g1479 | 862 | CDD | GT20_TPS | 61 | 553 | IPR001830 | GO:0003824(InterPro)|GO:0005992(InterPro) | |
Tan04g1479 | 862 | FunFam | alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 | 599 | 716 | - | - | |
Tan04g1479 | 862 | Pfam | Glycosyltransferase family 20 | 61 | 553 | IPR001830 | GO:0003824(InterPro)|GO:0005992(InterPro) | |
Tan04g1479 | 862 | PANTHER | TREHALOSE-6-PHOSPHATE SYNTHASE | 24 | 850 | IPR001830 | GO:0003824(InterPro)|GO:0004805(PANTHER)|GO:0005829(PANTHER)|GO:0005992(InterPro)|GO:0005992(PANTHER)|GO:0070413(PANTHER) | |
Tan04g1479 | 862 | NCBIfam | HAD-IIB family hydrolase | 602 | 803 | IPR006379 | - | |
Tan04g1479 | 862 | Gene3D | Glycogen Phosphorylase B; | 320 | 537 | - | - | |
Tan04g1479 | 862 | NCBIfam | trehalose-phosphatase | 598 | 847 | IPR003337 | GO:0005992(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan01g2209 | Tan-Chr1:26198772 | Tan04g1479 | Tan-Chr4:18882171 | 0.00E+00 | dispersed | |
Tan01g2210 | Tan-Chr1:26198772 | Tan04g1479 | Tan-Chr4:18882171 | 0.00E+00 | dispersed | |
Tan03g2598 | Tan-Chr3:79127018 | Tan04g1479 | Tan-Chr4:18882171 | 0.00E+00 | dispersed | |
Tan04g1479 | Tan-Chr4:18882171 | Tan09g2228 | Tan-Chr9:72247966 | 3.1e-310 | dispersed | |
Tan04g1479 | Tan-Chr4:18882171 | Tan04g1480 | Tan-Chr4:18882171 | 0.00E+00 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan04g1479 | K16055 | - | vvi:100252552 | 1487.24 |