Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan04g1512 ATGGTCATTCCCGCTGCCATTAACGCCCTCAAATCCTCGAGGTCAATATCTTGGTCGCCGGTTCCAATTTTTGATGGATCTGCGGGTAAATGGGTGGATGCAATAGAGGAGGTCGGTCTTAAGTTGGCTGTAGACCAGTGTGGCAACTGCTGTGAGAGAATGGCACCATATGTAAATGAACCTGTTCATGTGTGGAGAAACGACTGTTATCTTGTTGCTTTTCCAGCTTCAGCAATTCGTATTACTTATGGAATTGACTTTCCTCAGGTGCCTGACATTGGCTGCCAATGGTTTTCTACTGCCCCTTTGGACAACGTGTTCTATTCCAAACAAATAGCCCCATCAAGAACCTTTTGCATTTACGAGGAGGTAGAGCAAATGCGTAATATGGGACTCGTAAAAGGAGGCTCAATAGAAAATGCTTTGGTTTGCAGGTTAGTTGTTTTGTTCATACATCCTCATATTATCCAGTATTATTTGAATTAG 486 43.21 MVIPAAINALKSSRSISWSPVPIFDGSAGKWVDAIEEVGLKLAVDQCGNCCERMAPYVNEPVHVWRNDCYLVAFPASAIRITYGIDFPQVPDIGCQWFSTAPLDNVFYSKQIAPSRTFCIYEEVEQMRNMGLVKGGSIENALVCRLVVLFIHPHIIQYYLN 161
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 20686442 20755221 - Tan0011191.1 Tan04g1512 749916
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan04g1512 161 Gene3D lpxc deacetylase, domain 2 57 148 IPR011334 GO:0008759(InterPro)|GO:0009245(InterPro)
Tan04g1512 161 PANTHER UDP-3-O-ACYL-N-ACETYLGLUCOSAMINE DEACETYLASE 1, MITOCHONDRIAL-RELATED 20 148 IPR004463 GO:0008759(InterPro)|GO:0009245(InterPro)
Tan04g1512 161 Pfam UDP-3-O-acyl N-acetylglycosamine deacetylase 19 145 IPR004463 GO:0008759(InterPro)|GO:0009245(InterPro)
Tan04g1512 161 SUPERFAMILY Ribosomal protein S5 domain 2-like 60 144 IPR020568 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan04g1512 K02535 - csv:101205101 238.039