Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan04g1551 | ATGAACCTACAATTATATAATGTATTAAAAATCTGTCCACCTTCGTCTTCCTCCTCCTCTGTTCCGTTTTATATAATTCATCTGAAAAACTTCAACGAGAAAAAAAAGAAATCAAGAACATGCTCAGATTTTGAAATGAGCAATCGGACAGGACTTCTTCGAATTCGCCTGTTGCGAGGCATCAATCTCGCCATTCGCGATGCTCCCACGCGCAGCAGCGATCCATACGTTGTGATCTCCACCGCTAACCAGAAATTCAAATCTCGCGTGGTGAAAAAAAACTGCAATCCACAATGGAACGAGGAATTCACACTTTCAATTAGCGACATCAACACACCAATCAAATTAGCAGTGTTCGACAAAGATAGGTTCACGAAAGACGATGGAATGGGAGAGACAGAGATCGACATAAAACCATACATAGAGTGTTTGGATATGGGATTAGAGAATCTGCCAAATGGCTGTGTGGTGAAAAGGGTTCAACCAAGCAGATCAAACAGCCTTGCTGATGAAAGCCCTTGTGTTTGGAACGATGGCAAGATCATCCAAGACATGACTCTCAGATTGCAGAATGTTGAATGTGGTGAAATCATGATTCAGCTTCAGTTGTTCAATGCTTCTGGGATTAAAGGCATCAGAACCTACTCTTTCGCCTGA | 657 | 42.01 | MNLQLYNVLKICPPSSSSSSVPFYIIHLKNFNEKKKKSRTCSDFEMSNRTGLLRIRLLRGINLAIRDAPTRSSDPYVVISTANQKFKSRVVKKNCNPQWNEEFTLSISDINTPIKLAVFDKDRFTKDDGMGETEIDIKPYIECLDMGLENLPNGCVVKRVQPSRSNSLADESPCVWNDGKIIQDMTLRLQNVECGEIMIQLQLFNASGIKGIRTYSFA | 218 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 23410357 | 23412076 | - | Tan0014846.1 | Tan04g1551 | 749955 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan04g1551 | 218 | Pfam | C2 domain | 51 | 139 | IPR000008 | - | |
Tan04g1551 | 218 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 46 | 138 | IPR035892 | - | |
Tan04g1551 | 218 | Gene3D | C2 domain | 33 | 206 | IPR035892 | - | |
Tan04g1551 | 218 | PRINTS | C2 domain signature | 69 | 81 | IPR000008 | - | |
Tan04g1551 | 218 | PRINTS | C2 domain signature | 93 | 106 | IPR000008 | - | |
Tan04g1551 | 218 | PRINTS | C2 domain signature | 114 | 122 | IPR000008 | - | |
Tan04g1551 | 218 | SMART | C2_3c | 52 | 149 | IPR000008 | - | |
Tan04g1551 | 218 | ProSiteProfiles | C2 domain profile. | 34 | 153 | IPR000008 | - | |
Tan04g1551 | 218 | PANTHER | PROTEIN C2-DOMAIN ABA-RELATED 4 | 46 | 209 | IPR044562 | - | |
Tan04g1551 | 218 | CDD | C2_ArfGAP | 51 | 195 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan04g1551 | Tan-Chr4:23410357 | Tan11g1746 | Tan-Chr11:17730282 | 5.20E-60 | dispersed | |
Tan04g1551 | Tan-Chr4:23410357 | Tan09g1817 | Tan-Chr9:69593688 | 9.80E-51 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan04g1551 | - | - | - | 0.0 |