Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan04g1551 ATGAACCTACAATTATATAATGTATTAAAAATCTGTCCACCTTCGTCTTCCTCCTCCTCTGTTCCGTTTTATATAATTCATCTGAAAAACTTCAACGAGAAAAAAAAGAAATCAAGAACATGCTCAGATTTTGAAATGAGCAATCGGACAGGACTTCTTCGAATTCGCCTGTTGCGAGGCATCAATCTCGCCATTCGCGATGCTCCCACGCGCAGCAGCGATCCATACGTTGTGATCTCCACCGCTAACCAGAAATTCAAATCTCGCGTGGTGAAAAAAAACTGCAATCCACAATGGAACGAGGAATTCACACTTTCAATTAGCGACATCAACACACCAATCAAATTAGCAGTGTTCGACAAAGATAGGTTCACGAAAGACGATGGAATGGGAGAGACAGAGATCGACATAAAACCATACATAGAGTGTTTGGATATGGGATTAGAGAATCTGCCAAATGGCTGTGTGGTGAAAAGGGTTCAACCAAGCAGATCAAACAGCCTTGCTGATGAAAGCCCTTGTGTTTGGAACGATGGCAAGATCATCCAAGACATGACTCTCAGATTGCAGAATGTTGAATGTGGTGAAATCATGATTCAGCTTCAGTTGTTCAATGCTTCTGGGATTAAAGGCATCAGAACCTACTCTTTCGCCTGA 657 42.01 MNLQLYNVLKICPPSSSSSSVPFYIIHLKNFNEKKKKSRTCSDFEMSNRTGLLRIRLLRGINLAIRDAPTRSSDPYVVISTANQKFKSRVVKKNCNPQWNEEFTLSISDINTPIKLAVFDKDRFTKDDGMGETEIDIKPYIECLDMGLENLPNGCVVKRVQPSRSNSLADESPCVWNDGKIIQDMTLRLQNVECGEIMIQLQLFNASGIKGIRTYSFA 218
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 23410357 23412076 - Tan0014846.1 Tan04g1551 749955
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan04g1551 218 Pfam C2 domain 51 139 IPR000008 -
Tan04g1551 218 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 46 138 IPR035892 -
Tan04g1551 218 Gene3D C2 domain 33 206 IPR035892 -
Tan04g1551 218 PRINTS C2 domain signature 69 81 IPR000008 -
Tan04g1551 218 PRINTS C2 domain signature 93 106 IPR000008 -
Tan04g1551 218 PRINTS C2 domain signature 114 122 IPR000008 -
Tan04g1551 218 SMART C2_3c 52 149 IPR000008 -
Tan04g1551 218 ProSiteProfiles C2 domain profile. 34 153 IPR000008 -
Tan04g1551 218 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 46 209 IPR044562 -
Tan04g1551 218 CDD C2_ArfGAP 51 195 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan04g1551 Tan-Chr4:23410357 Tan11g1746 Tan-Chr11:17730282 5.20E-60 dispersed
Tan04g1551 Tan-Chr4:23410357 Tan09g1817 Tan-Chr9:69593688 9.80E-51 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan04g1551 - - - 0.0