Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan04g1596 ATGGGAATTAGGGAAGTATGGCTGTTATTGTCAATAATGCTTGCAACTTCAGCTGCTGCTGTGGATCAAAAGACCTACATTATTCACATGGACACCACGAAGATGGCTCCCACCACTAACCCTGAACAATGGTACACAGCCATGATTGATTCAGTCAATAAAATCTCATCTCTAGACGAAGAAGAAGAAGAAGCTTCAAATGCCGCTGATATTCTCTACGTGTACAAAACTGCTATTTCAGGTTTTGCTGCGAAGCTCTCCACCAAAAAACTTAATTCTTTAAGCAAAACTCCTGGCTTTCTGGCCGCCACTCCTAATGAACTACTACAACTTCACACCACCCACTCCCCTCAGTTTCTTGGCCTACAAAGAGACCATGGCCTTTGGAATTCTTCAAACTCAGCTTCTGATATAATTATTGGTTTGCTTGACACTGGGATTTGGCCTGAGCACATAAGTTTTCAGGACAAGGGTCTGGCCCCAGTGCCTTCAAAATGGAAGGGCATTTGTGAAGCAGGTACAAAGTTCTCACGTTCAAATTGCAACAAGAAACTCATTGGCGCTAGAGCCTACATTAAAGGCTACGAGGCCATTGTCGGTAGATTGAATGCAACCGGTATATTTCGATCGCCCCGAGACTCGGACGGGCATGGAACACATACTGCTTCGACTGCTGCTGGAAATATTGTGTACAATGCTAACTTTTATAATCAAGGTATCGGAGTAGCCGCTGGAATGAGGTTCACTTCAAGGATCGCAGCGTACAAAGTATGCTGGCAAGAAGGGTGCGCCAATGCCGATATTTTGGCAGCCATAGACCGCGCCGTTGAAGATGGGGTCGATGTTCTGTCACTCTCTTTGGGCGGCGGTGCCACTGCTTTTTACAAAGATGGTATTGCCATAGCTACATTTGGGGCTATTCGAAATGGGGTTTTTGTGTCATGTTCAGCTGGTAATTCTGGCCCATTTAGCTCAACTGTTGGTAATGTTGCTCCTTGGATCATGACAGTCGCTGCAAGCTACACTGATAGAACCTTCCCATCTACTGTAAAACTTGGAAATGGACAAGTTTTTGAAGGCTCCTCTTTGTATTCTGGGAACAACATAGTTCAACTCCCACTTGTTTATAACAATACTGCTGGTGGAGAAGAAGCAAATGTTTGTACGGCTGGTTCACTTGTCTCATCAATGGTGAAGGGAAAAATTGTGGTATGTGAAAGAGGAACAAACTCAAGAACTGCTAAAGGAGAGCAAGTGAAATTAGCAGGAGGAGCTGGAATGATTCTGATCAACACACAACTTGAAGGTGAGGAGCTTTTTGCTGACCCTCATGTTTTACCAGCCACTAATCTTGGAGCTTCAGCTGGCAAAGCCATCATAAACTATATAGCTTCCTCCAAACATCAATCAAAAGCTTCGATCGTATTTGAAGGGACTAAATATGGAAACCGAGCACCGAGAGTGGCTGCGTTTTCTTCTCGAGGGCCGAGCTTCATCGGACCGGATGTGATAAAGCCAGACGTAACTGCACCTGGTGTTAATATATTAGCTGCTTGGCCACTCATTTCGAGCCCAAGTGAGCTTCAGTCTGATAAAAGAAGAGTGTTGTTCAATATCATCTCAGGGACTTCTATGTCTTGCCCTCATGTTAGCGGCTTAGCTGCGCTTCTTAAATCAGCACACAAGGATTGGTCACCTGCCGCCATCAAATCTGCACTCATGACCACAGCTTACACTAATGACAACAAAATGAGTCCCATTTCCGACGTCGGCTCTGCCAACGGCAAACCCGCAAACCCTTTTGCGTTCGGTTCCGGCCATGTCGATCCAGAGAAAGCTTCTGATCCAGGGCTCGTCTATGATATCACACCGCAAGACTACCTAAACTACTTGTGTAGCTTGAACTATAATTCAACACAGATTGCTTTAGTTTCAAGAGGGAATTTCAGATGTCCATCAAAAAGAACATTACTTCAGCCAGGGGACTTGAACTACCCTTCTTTCTCTGTGTTCATGAAGAAGAAGGCCAAAAATGTTACTGTTACATTGAAGAGAACAGTGACAAATGTTGGTAGTCCAAGGAGTGATTACACTGTTGAAATCAACAGTCCAAAGGGATTAACAATTATTGTGAAGCCCGAAAAGTTAAGTTTTAAGAGATTGGGAGAGAAGTTAAGTTACAAAGTGAGTTTTGTTGCATTAGGGAAAAGAGAAGCTTTGAGTGATTTTTCTTTTGGATCTCTTATTTGGTTCTCAGGAAAATATGCTGTGAGGAGTCCTATAGCAGTAACTTGGCACTAG 2301 43.94 MGIREVWLLLSIMLATSAAAVDQKTYIIHMDTTKMAPTTNPEQWYTAMIDSVNKISSLDEEEEEASNAADILYVYKTAISGFAAKLSTKKLNSLSKTPGFLAATPNELLQLHTTHSPQFLGLQRDHGLWNSSNSASDIIIGLLDTGIWPEHISFQDKGLAPVPSKWKGICEAGTKFSRSNCNKKLIGARAYIKGYEAIVGRLNATGIFRSPRDSDGHGTHTASTAAGNIVYNANFYNQGIGVAAGMRFTSRIAAYKVCWQEGCANADILAAIDRAVEDGVDVLSLSLGGGATAFYKDGIAIATFGAIRNGVFVSCSAGNSGPFSSTVGNVAPWIMTVAASYTDRTFPSTVKLGNGQVFEGSSLYSGNNIVQLPLVYNNTAGGEEANVCTAGSLVSSMVKGKIVVCERGTNSRTAKGEQVKLAGGAGMILINTQLEGEELFADPHVLPATNLGASAGKAIINYIASSKHQSKASIVFEGTKYGNRAPRVAAFSSRGPSFIGPDVIKPDVTAPGVNILAAWPLISSPSELQSDKRRVLFNIISGTSMSCPHVSGLAALLKSAHKDWSPAAIKSALMTTAYTNDNKMSPISDVGSANGKPANPFAFGSGHVDPEKASDPGLVYDITPQDYLNYLCSLNYNSTQIALVSRGNFRCPSKRTLLQPGDLNYPSFSVFMKKKAKNVTVTLKRTVTNVGSPRSDYTVEINSPKGLTIIVKPEKLSFKRLGEKLSYKVSFVALGKREALSDFSFGSLIWFSGKYAVRSPIAVTWH 766
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 27040926 27045711 - Tan0000458.1 Tan04g1596 750000
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan04g1596 766 Gene3D - 631 765 - -
Tan04g1596 766 ProSitePatterns Serine proteases, subtilase family, serine active site. 542 552 IPR023828 -
Tan04g1596 766 Pfam Fibronectin type-III domain 662 763 IPR041469 -
Tan04g1596 766 SUPERFAMILY Subtilisin-like 111 618 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Tan04g1596 766 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 11 112 IPR037045 -
Tan04g1596 766 Gene3D - 343 481 - -
Tan04g1596 766 CDD Peptidases_S8_3 109 578 IPR034197 -
Tan04g1596 766 FunFam Subtilisin-like protease SBT1.5 137 354 - -
Tan04g1596 766 CDD PA_subtilisin_like 349 467 - -
Tan04g1596 766 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 25 761 IPR045051 -
Tan04g1596 766 SUPERFAMILY PA domain 357 468 IPR046450 -
Tan04g1596 766 Pfam Peptidase inhibitor I9 25 112 IPR010259 -
Tan04g1596 766 PRINTS Subtilisin serine protease family (S8) signature 135 154 IPR015500 -
Tan04g1596 766 PRINTS Subtilisin serine protease family (S8) signature 541 557 IPR015500 -
Tan04g1596 766 PRINTS Subtilisin serine protease family (S8) signature 213 226 IPR015500 -
Tan04g1596 766 Pfam Subtilase family 136 606 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Tan04g1596 766 ProSiteProfiles Serine proteases, subtilase domain profile. 119 614 - -
Tan04g1596 766 FunFam Subtilisin-like protease SBT1.5 631 766 - -
Tan04g1596 766 FunFam subtilisin-like protease SBT1.5 343 481 - -
Tan04g1596 766 Gene3D Peptidase S8/S53 domain 137 627 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Tan04g1596 766 Pfam PA domain 370 459 IPR003137 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan04g1596 Tan-Chr4:27040926 Tan06g0124 Tan-Chr6:1147046 1.30E-195 dispersed
Tan04g1593 Tan-Chr4:26770650 Tan04g1596 Tan-Chr4:27040926 0.00E+00 proximal
Tan04g1596 Tan-Chr4:27040926 Tan04g1597 Tan-Chr4:27209440 0.00E+00 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan04g1596 - - - 0.0