Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan04g1600 ATGGTCTATAGTTACACAAAAAGCTTCAATGCATTTGCTGCCAAGCTTACTGAAGAGGAAGCCAAAACATTGTCAAAGAGGGAAGATGTGCATCATGTAATCCGAAACAAATATAGAAAGCTTCAAACAACAAGATCATGGGACTTTATTGGATTGCCTTCCAATGCAAGAAGAAATACCAAACACGAGAGTGATATTGTTGTGGGTCTATTTGATACTGGGATCACTCCAACGGCGGAGAGTTTTAAAGATGATGGGTTTGGTCCGCCACCTAAAAAATGGAAAGGCAGCTGTCACCACTTTGCGAATTTCACTGGCTGCAACAACAAACTCATCGGAGCAAGATATTTCAAGCTCGATGGAACCCACGATCCGGTCGACATCTTGTCGCCAGTAGACGTCGATGGCCACGGCACGCACACATCCTCAACAGCAACGGGCAATGCAGTTGCCGGAGCCAGCCTCTCTGGTCTAGCCAAAGGAACCGCCCGCGGCGGCGTGCCCTCAGCAAGAGTTGCCATGTACAAGGTCTGCTGGGCTAGCTCCGGGTGCGCCGATATGGATATTCTGGCTGCCTTTGACGCCGCCATACAGGACGGCGTCGATGTCATTTCGATATCGATTGGCGGCGGCTTTGGCAATTACTCCGAGGACTCAATCTCCATCGGTGCGTTTCATGCCATGAAGAAGGGCATTATCACCGTGACTTCTGCCGGCAATGACGGCCCCAATGCCGGGAGCGTCGTCAACCACGCGCCGTGGATTGTGACGGTTGCTGCCAGTTCAATTGATCGGAAATTTATCAGCCCGTTGGAGCTGGGCAATGGGAAGAACATCTCTGGAGTAGGGATAAACACATTCAATCCAAAGCAAAAAATGTACCCTTTAGTGAACGGAAGGGATGTGGCGAGGAACTCAGAGAGCAAAGACAGTGCAAGCTATTGCGAAGAGGACTCACTTGATCCAAACAAGGTCAAAGGAAGCCTTGTGTTCTGCAAATTGATGACTTGGGGCGCTGATTCTGTTGTCAAATCCCTTGGTGCTAATGGCGTTATCATTCAAACTGATCAGTTTCTTGACAATGCTGATATCTTCATGGCCCCTGCCACCATGGTTAGTAGCCTTGTTGGTGATGCTATTCACGCTTATATCAAGTCCACAAGAACACCAACGGCAGTGATATACAGAACAAGACAACTCAAAGCAAAAGCTCCAATGGTGGCTTCCTTCTCATCCAGAGGTCCAAATCCAGGATCCAACCGCATTCTAAAGCCGGACATAGCAGCGCCAGGAGTGGACATATTGGCAGGGTACACGCCGCTGAAGACACTAACCGGGCTGAAGGGCGACACTCAATTCTCAAAATTCACGCTCATGTCTGGAACTTCCATGGCCTGTCCCCATGTCGCTGCCGCCGCCGCCTATGTCAAGTCTTTCCACCCTCTTTGGTCACCCGCCGCCATTAGATCCGCCTTGATCACCACTGCAAAACCGATCAGTCGACGACTGAATCCGGACGGCGAATTCGCATACGGTGCTGGCAACTTAAATCCATCAAGAGCTAAAAACCCTGGCCTAATCTACGACCTCAATGAAATGTCCTATGTCCAATTCCTCTGCAGTGAAGGCTACACTGGATCTTCAATCGCAGTCCTTGCTGGAACCAAATCCATAAACTGCTCCACTTTAATCCCTGGCAAAGGCCATGACTCTCTCAATTACCCAACCATTCAACTCAGCCTCAAAAGCACTCGAAGGTCGATGACCACCGTGTTTCGACGGCGAGTCACCAACGTTGGTCGCCCCGTCTCTGTATACAATGCCACCGTCCGGGCTCCCCCTGGGGTGGAGATCACAGTGACGCCAGCAACTCTGTCATTCTCCCGACTGCTGCAGAAACAGAGCTTTAAGGTCGTTGTGAAGGCTAGTCCTATGCCATCCGCGAAAATGGTGTCGGGTTCGCTTACTTGGGTTGGTGCTCGACATGTCGTGAGAAGTCCTATTGTTGTTTATAGCCCATGA 2022 50.25 MVYSYTKSFNAFAAKLTEEEAKTLSKREDVHHVIRNKYRKLQTTRSWDFIGLPSNARRNTKHESDIVVGLFDTGITPTAESFKDDGFGPPPKKWKGSCHHFANFTGCNNKLIGARYFKLDGTHDPVDILSPVDVDGHGTHTSSTATGNAVAGASLSGLAKGTARGGVPSARVAMYKVCWASSGCADMDILAAFDAAIQDGVDVISISIGGGFGNYSEDSISIGAFHAMKKGIITVTSAGNDGPNAGSVVNHAPWIVTVAASSIDRKFISPLELGNGKNISGVGINTFNPKQKMYPLVNGRDVARNSESKDSASYCEEDSLDPNKVKGSLVFCKLMTWGADSVVKSLGANGVIIQTDQFLDNADIFMAPATMVSSLVGDAIHAYIKSTRTPTAVIYRTRQLKAKAPMVASFSSRGPNPGSNRILKPDIAAPGVDILAGYTPLKTLTGLKGDTQFSKFTLMSGTSMACPHVAAAAAYVKSFHPLWSPAAIRSALITTAKPISRRLNPDGEFAYGAGNLNPSRAKNPGLIYDLNEMSYVQFLCSEGYTGSSIAVLAGTKSINCSTLIPGKGHDSLNYPTIQLSLKSTRRSMTTVFRRRVTNVGRPVSVYNATVRAPPGVEITVTPATLSFSRLLQKQSFKVVVKASPMPSAKMVSGSLTWVGARHVVRSPIVVYSP 673
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 27325401 27346204 - Tan0009884.2 Tan04g1600 750004
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan04g1600 673 Pfam Peptidase inhibitor I9 1 42 IPR010259 -
Tan04g1600 673 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 1 42 IPR037045 -
Tan04g1600 673 CDD PA_subtilisin_like 271 394 - -
Tan04g1600 673 ProSiteProfiles Serine proteases, subtilase domain profile. 46 522 - -
Tan04g1600 673 ProSitePatterns Serine proteases, subtilase family, serine active site. 461 471 IPR023828 -
Tan04g1600 673 Gene3D Peptidase S8/S53 domain 65 535 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Tan04g1600 673 PRINTS Subtilisin serine protease family (S8) signature 63 82 IPR015500 -
Tan04g1600 673 PRINTS Subtilisin serine protease family (S8) signature 133 146 IPR015500 -
Tan04g1600 673 PRINTS Subtilisin serine protease family (S8) signature 460 476 IPR015500 -
Tan04g1600 673 Gene3D - 264 400 - -
Tan04g1600 673 CDD Peptidases_S8_3 40 496 IPR034197 -
Tan04g1600 673 Gene3D - 539 672 - -
Tan04g1600 673 Pfam Fibronectin type-III domain 572 670 IPR041469 -
Tan04g1600 673 SUPERFAMILY Subtilisin-like 41 526 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Tan04g1600 673 FunFam Subtilisin-like protease SBT1.5 65 273 - -
Tan04g1600 673 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 1 669 IPR045051 -
Tan04g1600 673 Pfam Subtilase family 64 512 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Tan04g1600 673 FunFam Subtilisin-like protease SBT1.5 539 673 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan04g1598 Tan-Chr4:27285141 Tan04g1600 Tan-Chr4:27325401 0.00E+00 dispersed
Tan04g1600 Tan-Chr4:27325401 Tan08g1743 Tan-Chr8:69231702 2.50E-169 dispersed
Tan04g1599 Tan-Chr4:27325401 Tan04g1600 Tan-Chr4:27325401 0.00E+00 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan04g1600 - - - 0.0