Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan04g1605 ATGACTTTGATCACTTCTTCCAAGGATTATGTGGCTACTCGATGGTACCGTGCTCCTGAACTCTGTGGTTCTTTTTTCTCAAAGTACACACCAGCTATTGATATTTGGAGCATAGGATGTATATTTGCTGAAATGTTGGCAGGCAAGCCATTGTTTCCTGGGAAAAGTGTTGTCCATGAGCTGGATTTAATAACCGACTTACTTGGTACTCCTTCGGCTGAATGTATTGCTAAGATTCGTAATGAAAAGGCTAAAAGATATTTGAATAGCATGAAAAAAAAGCATCCTATTCCTCTGTCAAGAAAGTTCCCTAATGCAGATCCACTAGCTCTTCGTTTACTTGAGCGTCTGCTTGCATTTGATCCTGATGATCGTCCTTCTGCAGAGGAGGCATTAGCTGATCCATATTTCCATGGACTGGCAAATGTGGAGGATGAACCATCCAGGCAACCTATTTCAAAACTTGAGTTTGAGTTTGAAAGGAGAAAGTTGACCAAAGATGATGTCAGAGAGCTTATTTATAGAGAAATTTTAGAGTATCATCCTCAAATGCTACAGGAGTACCTTCAAGGTTCTGAGAGTCACTTCTTGTATCCCAGTGGAATTGATCGATTCAAGCGTCAATTTGATCATCTTGAGGAACATTCTGGTAAAGGTGAGAGAGGCAGTCCACTCCTGAGGAAGTATGTCTCCTTGCCTAGGGAGCGAATATATACACCAAGAGATGGAGATGATGACGAAAATTGTAAAACAGAACAGCGTAATGCAACTTCAGCTGAACATGCAAAGCTTCAAAGCCCTCCTGGACCTGGTTATTCATTAACTGCTCTGAGTGGTTCTGTTCAAGTAGACTGCAGTAATTATAACCTGTTGAGGAGTGCAAGTATTAGTTGTTCTAAATGGGTGGATTAA 912 41.01 MTLITSSKDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLAGKPLFPGKSVVHELDLITDLLGTPSAECIAKIRNEKAKRYLNSMKKKHPIPLSRKFPNADPLALRLLERLLAFDPDDRPSAEEALADPYFHGLANVEDEPSRQPISKLEFEFERRKLTKDDVRELIYREILEYHPQMLQEYLQGSESHFLYPSGIDRFKRQFDHLEEHSGKGERGSPLLRKYVSLPRERIYTPRDGDDDENCKTEQRNATSAEHAKLQSPPGPGYSLTALSGSVQVDCSNYNLLRSASISCSKWVD 303
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 27652013 27657856 - Tan0004970.1 Tan04g1605 750009
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan04g1605 303 SUPERFAMILY Protein kinase-like (PK-like) 7 183 IPR011009 -
Tan04g1605 303 MobiDBLite consensus disorder prediction 236 257 - -
Tan04g1605 303 FunFam - 11 83 - -
Tan04g1605 303 Gene3D Phosphorylase Kinase; domain 1 161 183 - -
Tan04g1605 303 MobiDBLite consensus disorder prediction 236 271 - -
Tan04g1605 303 ProSiteProfiles Protein kinase domain profile. 1 137 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan04g1605 303 SMART serkin_6 1 137 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan04g1605 303 FunFam Mitogen-activated protein kinase 161 183 - -
Tan04g1605 303 Gene3D Transferase(Phosphotransferase) domain 1 7 160 - -
Tan04g1605 303 Pfam Protein kinase domain 7 137 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan04g1605 303 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 8 178 IPR050117 GO:0004674(PANTHER)|GO:0004707(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0035556(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan04g1605 Tan-Chr4:27652013 Tan04g1607 Tan-Chr4:27652013 7.80E-131 dispersed
Tan04g1605 Tan-Chr4:27652013 Tan04g1606 Tan-Chr4:27652013 8.20E-173 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67461 PF00069 Pkinase 2.30E-20 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan04g1605 - - - 0.0