Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan04g1606 | ATGGTTGACAAGGAATTTTTCACTGAATATGGTGAAGCTACTCAATATGAAATTGAAGAAGTTATAGGTAGAGGGAGCTATGGGGTTGTTGCATCCGCCATAGACACTCACTCTGGTGAGAAAGTTGCCATCAAGAAGATTACTAATGTCTTCGAGCATGTTTCGGATGCCACACGGATTCTAAGAGAGATTAAGCTCCTTCGGTTTCTCCATCATCCTGATATTGTGGATATAAAACATATAATACTTCCTCCATCCAGAAGGGAGTTCAAAGATTTGTACATTGTTTTTGAGTTGATGGAGTCTGACCTTCATCATGTACTCAAGGCTAATGATGATCTCACCCCTCAACATCATCAATTTTTCTTGTATCAACTTCTTAGAGCCTTGAAGTATATACATTCAGCTCACGTGTTCCATAGAGATTTGAAGCCAAAGAATATACTTGCCAATGCAGACTGTAAACTGAAGATCTGTGACTTTGGGCTTGCTCGTGCTTCTTTTACTGATGCCCCATCTGCTATTTTTTGGACTGATTATGTGGCTACTCGATGGTACCGTGCTCCTGAACTCTGTGGTTCTTTTTTCTCAAAGTACACACCAGCTATTGATATTTGGAGCATAGGATGTATATTTGCTGAAATGTTGGCAGGCAAGCCATTGTTTCCTGGGAAAAGTGTTGTCCATGAGCTGGATTTAATAACCGACTTACTTGGTACTCCTTCGGCTGAATGTATTGCTAAGATTCGTAATGAAAAGGCTAAAAGATATTTGAATAGCATGAAAAAAAAGCATCCTATTCCTCTGTCAAGAAAGTTCCCTAATGCAGATCCACTAGCTCTTCGTTTACTTGAGCGTCTGCTTGCATTTGATCCTGATGATCGTCCTTCTGCAGAGGAGGCATTAGCTGATCCATATTTCCATGGACTGGCAAATGTGGAGGATGAACCATCCAGGCAACCTATTTCAAAACTTGAGTTTGAGTTTGAAAGGAGAAAGTTGACCAAAGATGATGTCAGAGAGCTTATTTATAGAGAAATTTTAGAGTATCATCCTCAAATGCTACAGGAGTACCTTCAAGGTTCTGAGAGTCACTTCTTGTATCCCAGTGGAATTGATCGATTCAAGCGTCAATTTGATCATCTTGAGGAACATTCTGGTAAAGGTGAGAGAGGCAGTCCACTCCTGAGGAAGTATGTCTCCTTGCCTAGGGAGCGAATATATACACCAAGAGATGGAGATGATGACGAAAATTGTAAAACAGAACAGCGTAATGCAACTTCAGCTGAACATGCAAAGCTTCAAAGCCCTCCTGGACCTGGTTATTCATTAACTGCTCTGAGTGGTTCTGTTCAAGTAGACTGCAGTAATTATAACCTGTTGAGGAGTGCAAGTATTAGTTGTTCTAAATGGGTGGATTAA | 1422 | 40.58 | MVDKEFFTEYGEATQYEIEEVIGRGSYGVVASAIDTHSGEKVAIKKITNVFEHVSDATRILREIKLLRFLHHPDIVDIKHIILPPSRREFKDLYIVFELMESDLHHVLKANDDLTPQHHQFFLYQLLRALKYIHSAHVFHRDLKPKNILANADCKLKICDFGLARASFTDAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLAGKPLFPGKSVVHELDLITDLLGTPSAECIAKIRNEKAKRYLNSMKKKHPIPLSRKFPNADPLALRLLERLLAFDPDDRPSAEEALADPYFHGLANVEDEPSRQPISKLEFEFERRKLTKDDVRELIYREILEYHPQMLQEYLQGSESHFLYPSGIDRFKRQFDHLEEHSGKGERGSPLLRKYVSLPRERIYTPRDGDDDENCKTEQRNATSAEHAKLQSPPGPGYSLTALSGSVQVDCSNYNLLRSASISCSKWVD | 473 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 27652013 | 27658184 | - | Tan0004970.2 | Tan04g1606 | 750010 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan04g1606 | 473 | SMART | serkin_6 | 16 | 307 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Tan04g1606 | 473 | Pfam | Protein kinase domain | 16 | 307 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Tan04g1606 | 473 | ProSitePatterns | Protein kinases ATP-binding region signature. | 22 | 46 | IPR017441 | GO:0005524(InterPro) | |
Tan04g1606 | 473 | FunFam | Mitogen-activated protein kinase | 331 | 353 | - | - | |
Tan04g1606 | 473 | PANTHER | MITOGEN-ACTIVATED PROTEIN KINASE | 13 | 348 | IPR050117 | GO:0004674(PANTHER)|GO:0004707(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0035556(PANTHER) | |
Tan04g1606 | 473 | Gene3D | Transferase(Phosphotransferase) domain 1 | 102 | 330 | - | - | |
Tan04g1606 | 473 | MobiDBLite | consensus disorder prediction | 406 | 441 | - | - | |
Tan04g1606 | 473 | ProSiteProfiles | Protein kinase domain profile. | 16 | 307 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Tan04g1606 | 473 | FunFam | Mitogen-activated protein kinase | 102 | 330 | - | - | |
Tan04g1606 | 473 | SUPERFAMILY | Protein kinase-like (PK-like) | 13 | 313 | IPR011009 | - | |
Tan04g1606 | 473 | FunFam | Mitogen-activated protein kinase | 5 | 108 | - | - | |
Tan04g1606 | 473 | CDD | STKc_TDY_MAPK | 15 | 352 | - | - | |
Tan04g1606 | 473 | MobiDBLite | consensus disorder prediction | 406 | 427 | - | - | |
Tan04g1606 | 473 | ProSitePatterns | MAP kinase signature. | 51 | 154 | IPR003527 | GO:0004707(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Tan04g1606 | 473 | Gene3D | Phosphorylase Kinase; domain 1 | 32 | 353 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan04g1606 | Tan-Chr4:27652013 | Tan09g1832 | Tan-Chr9:69723447 | 8.50E-209 | dispersed | |
Tan04g1605 | Tan-Chr4:27652013 | Tan04g1606 | Tan-Chr4:27652013 | 8.20E-173 | tandem | |
Tan04g1606 | Tan-Chr4:27652013 | Tan04g1607 | Tan-Chr4:27652013 | 1.90E-237 | tandem |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
67462 | PF00069 | Pkinase | 4.30E-67 | CL0016 | Tan | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan04g1606 | - | - | - | 0.0 |