Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan04g1641 ATGAAACTTATGGTTTTGAGGTACTCTCCATTTTTCTTTGTCTTGTTGGTTTGTGTGCTACCTCTGGTTCGAGCAGGAGATGCAGAAGCTCTGTTAGCATTAAAAGAATCTCTCGACCCTGGGAACTCGCTGCCATGGCGAGGAAGCTCCGTCTGCAACTGGCAAGGTGTAAAAGAGTGCACAAATGGACGGGTAACGAAGCTCGTTTTGGAGCATCTAAATCTCTCTGGTGTTCTTAACCACAAGATTTTGAATCGTTTGGATCAGCTTCGTGTTCTTAGTTTCAAAGGAAATTCACTTTCCGGCCAAATCCCTGACCTCTCGGGTCTTGTTAATCTCAAGTCTCTCTATCTAAGCGACAACAACTTTTCCGGCGAGTTTCCGAGCTCCATCTCGGATCTCCACCGTTTGAAGGTCGTCGTTCTTTCTGGTAACCAAATATCTGGTCCTATCCCAAACTCGCTGCTGAAACTCCGGCGTCTCTATGTTCTACACCTTCAGGACAACCAATTCAGCGGCTCCATCCCTCCTTTCAACCAAACCAGTCTTCGTTTCTTCAATGTCTCTAACAACCGCCTCTCCGGCGACATCCCAGCAACCCCCGCCTTGGCCCGCTTCAATGTGTCGTCATTTTCCGGCAACCTGGAGCTTTGCGGGGAACAAATTCAGAACACCTGTGGAAATGTTGCCACTGTGCCATCATCGAGTCCCTCTTATCCACAAATCCAAAGTTCAAGCTCGTCTTCAAGACGTAAAAAATTAGTCAAGATAATAGCAGGAAGCGTTGGTGGGTTCATCGGACTTGTGTTAATAATTCTTCTACTGTGTATGATTTGCAAGTGTAGGGAAAGAAAGAGCCTAGCGGAGGTTAGAAACAAAGGAATCGGCGACGAGGGGATGGGGATGGGGATGGAGGAAACATCTGGAACGGCCGGCGGTGGCAGAGGAGGTAATAACGGAGGAAAGCAAGGGGGTTTTTCGTGGGAAAGTGAAGGACTAGGGAGTCTAGTGTTTTGCGGAGCAGGGGATCAGAAAATGACATATAGCTTGGAAGATCTATTGAAAGCTTCGGCGGAGACTTTGGGGAGAGGGACCATCGGAAGCACATACAAGGCAGTGATGGAATCTGGGTATATTGTTACAGTGAAACGGCTGAAGGATGCAAGGTACCCTCGACCAGAGGAGTTCGGTCGGCAGATGGAGGTTCTTGGGCGGCTCAGACATCCCAACCTAGTCCCTCTCAGGGCCTATTTCCAGGCTAAGGAGGAACGCTTGCTCGTATACGATTATTTCCCTAATGGCAGTCTCTTCTCTCTCATCCACGGATCGAGAACTTCAGGTGGAGGAAAGCCTCTTCATTGGACATCCTGCCTCAAAATAGCTGAAGACTTGGCCAATGGTCTGCTGTATATCCACCAGAACCCTGGCTTAACCCATGGAAACCTTAAATCCTCAAACGTACTATTAGGATCTGATTTCGAGTCATGTCTTACTGATTATGGTCTTAACTTATTCCGAGATCCCGATTCACTTGAAGAACCTAGCGCAACTTCACTCTTTTACCGAGCTCCCGAATGCCGCGACATTCGTAAGCCAACCACACAACAAGCCGACATCTATAGCTTTGGTGTTCTTCTGTTGGAGCTTCTAACTGGAAAAACACCATTTCAAGATCTAGTCCAAGAGCATGGTTCTGACATTCCCAAGTGGGTTAATTCCGTTAGAGAAGAGGAGACGGAGTCTGGGGACGATCCTGCATCTGGGAATGAGGCATCGGAAGAGAAACTTCAAGCTCTTTTGAACATTGCAATGGCTTGTGTTTCGCTCATTCCACAAAACCGACCGACGATGAGGGATGTTCTAAAGATGATAAGAGATACAAGAGCAGAGGCTCAAATCTCATCCAACAGTAGTGACCATTCACCAGGGAGATGGTCAGATATCGTCCAGAGTTTGCCCAGGGAAGAACATTTAAGCATTTGA 1983 47.6 MKLMVLRYSPFFFVLLVCVLPLVRAGDAEALLALKESLDPGNSLPWRGSSVCNWQGVKECTNGRVTKLVLEHLNLSGVLNHKILNRLDQLRVLSFKGNSLSGQIPDLSGLVNLKSLYLSDNNFSGEFPSSISDLHRLKVVVLSGNQISGPIPNSLLKLRRLYVLHLQDNQFSGSIPPFNQTSLRFFNVSNNRLSGDIPATPALARFNVSSFSGNLELCGEQIQNTCGNVATVPSSSPSYPQIQSSSSSSRRKKLVKIIAGSVGGFIGLVLIILLLCMICKCRERKSLAEVRNKGIGDEGMGMGMEETSGTAGGGRGGNNGGKQGGFSWESEGLGSLVFCGAGDQKMTYSLEDLLKASAETLGRGTIGSTYKAVMESGYIVTVKRLKDARYPRPEEFGRQMEVLGRLRHPNLVPLRAYFQAKEERLLVYDYFPNGSLFSLIHGSRTSGGGKPLHWTSCLKIAEDLANGLLYIHQNPGLTHGNLKSSNVLLGSDFESCLTDYGLNLFRDPDSLEEPSATSLFYRAPECRDIRKPTTQQADIYSFGVLLLELLTGKTPFQDLVQEHGSDIPKWVNSVREEETESGDDPASGNEASEEKLQALLNIAMACVSLIPQNRPTMRDVLKMIRDTRAEAQISSNSSDHSPGRWSDIVQSLPREEHLSI 660
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 32025416 32031414 - Tan0010219.1 Tan04g1641 750045
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan04g1641 660 Gene3D Phosphorylase Kinase; domain 1 338 430 - -
Tan04g1641 660 Gene3D Transferase(Phosphotransferase) domain 1 431 646 - -
Tan04g1641 660 MobiDBLite consensus disorder prediction 631 660 - -
Tan04g1641 660 Pfam Leucine Rich Repeat 182 199 IPR001611 GO:0005515(InterPro)
Tan04g1641 660 SUPERFAMILY L domain-like 29 214 - -
Tan04g1641 660 MobiDBLite consensus disorder prediction 631 645 - -
Tan04g1641 660 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 26 632 IPR046959 -
Tan04g1641 660 FunFam Nuclear pore complex protein NUP107 24 177 - -
Tan04g1641 660 MobiDBLite consensus disorder prediction 570 591 - -
Tan04g1641 660 Pfam Protein kinase domain 358 622 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan04g1641 660 Gene3D Ribonuclease Inhibitor 25 179 IPR032675 -
Tan04g1641 660 Pfam Leucine rich repeat N-terminal domain 26 57 IPR013210 -
Tan04g1641 660 ProSiteProfiles Protein kinase domain profile. 355 633 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan04g1641 660 Pfam Leucine rich repeat 112 171 IPR001611 GO:0005515(InterPro)
Tan04g1641 660 SUPERFAMILY Protein kinase-like (PK-like) 359 633 IPR011009 -
Tan04g1641 660 Gene3D Ribonuclease Inhibitor 180 229 IPR032675 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan03g1568 Tan-Chr3:71923317 Tan04g1641 Tan-Chr4:32025416 5.40E-111 dispersed
Tan04g1641 Tan-Chr4:32025416 Tan08g0198 Tan-Chr8:1771376 5.50E-81 dispersed
Tan04g1641 Tan-Chr4:32025416 Tan04g1642 Tan-Chr4:32025416 0.00E+00 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67464 PF00069 Pkinase 1.30E-35 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan04g1641 - - - 0.0