Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan04g1667 ATGGGCGAAGACAGCAGTAATAATAGGAGCAATGGCGGTAGCCGGTTGGCACCGCCGCAGGCTCAGGCGGAGCACTGTGTTGAGATTGTTCATCCGGTGGTTCCGCCGCCGCACAGAAGCGGGTTGCAGAGGCTAGGCAACCGGCTGAAGGAAACATTTTTTCCCGACGATCCACTCCGACAGTTCAAAGGGCAGTCTCCGGCGAGGAAATGGGTGATTGGAGCTCAGTATATATTCCCAATTCTTCAATGGGGGCCTCATTATAATCTTAGGCTTTTTAAATCTGATGTTGTTGCTGGCCTCACTATTGCTAGCTTGGCCATCCCTCAGGGTATTAGCTATGCTAAGCTTGCTAATTTGCCTCCTATTGTTGGGCTTTATTCAAGCTTTGTTCCACCACTTGTATACGCTGTACTTGGAAGCTCAAGAGACTTAGCCGTTGGACCCGTTTCAATAGCATCACTAATACTGGGATCCATGCTGAGGCAAGAAGTTTCCCCCATCAAAGATCCCATACTCTTTCTTCAACTCGGCTTCACTTCCACCTTCTTTGCCGGTCTCTTCCAGGCCTCGCTCGGCTTCCTAAGACTTGGGTTTATAATTGATTTTCTATCGAAGGCGACTTTGATTGGATTCATGGCGGGAGCGGCCATCATTGTGTCTCTGCAGCAGCTTAAAGGGTTGCTTGGAATTACCCATTTCACCAAACAGATGGGTTTGATTCCTGTTTTGAGCTCAGTTTTTCATCAAACTCACGAGTGGTCGTGGCAGACTATTCTGATGGGCTTTTGTTTCCTTCTCTTCCTTCTAATCACGAGACACATTAGCATGAAAAGGCCAAAGTTATTCTGGATATCAGCTGGAGCTCCTTTAGTGTCGGTGATTCTTTCAACCATATTGGTTTTTGCATTCAAGGCAGATCGTCATGGCATAAGTATAATAGGAAAATTGCAACAAGGGTTAAACCCACCTTCATGGAACATGCTTCGTTTGCAAGGGTCGCATCTTGGCCTTGTTATTAAGACTGGCCTCGTCACCGGCATCATCTCTCTCACTGAAGGAATAGCAGTGGGGCGAACATTTGCAGCTATTAAAGACTACCGCGTCGACGGCAACAAAGAAATGATCGCAATCGGCCTCATGAACGTTGTCGGCTCTTTCACTTCCTGCTACGTCACAACAGGTGCGTTTTCGAGGTCGGCAGTGAACCATAACGCAGGGGCGAAAACGGCAGTGTCGAACATCATAATGTCAGTGACAATAATGGTGACACTGCTGTTTCTAATGCCTCTGTTTCAGTACACGCCTAATCTTGTGCTGGCCGCCATCATCGTCACCGCCGTCGTCGGCCTTATCGATGTCCCGGCCGCCTACTCCATTTGGAAGGTTGATAAGTTCGATTTTGTTGTGATGCTCTGTGCCTTCTTCGGCGTCATTCTCATCTCTGTTCAACACGGTCTCGCCATTGCTGTTGGCATATCCATTTTCAAGATCATCTTGCAAATCACCAGGCCAAAAACAGTGATGTTGGGGAACATACCTGGGACAGATATATATAGAAACCTTGACCATTACAAGGATGCAATGAGTGTCCAAGGCTTCCTCATTTTAAGCATTGAAGCTCCTATCAACTTTGCCAACACTACATATCTTAATGAAAGGATTTTGAGATGGATTGAGGATTATGAAGCTGAAGATTTTGTTAAGAAGGAAGGCTCTCGCCTTCAATTTGTTATTTTAGAATTGTCAGCTGTGAGTGCTATAGATACAAGTGGAGTCCTACTCTTCAAGGATCTAAGAAGAGCATTGGAAAAGAAGGATGTTGAGCTTGTGTTGGTGAACCCATTGGGTGAAGTTTTGGAAAAGTTGCAAAAAGCAGATGAAAATCAGGAGATTTTGAGGACAAATAATGTGTTCTTGACAGTGGGAGAGGCCATTGCTTCACTATCAGCAACAATGAAGGGGCAATCCTCAAGTATATAG 1983 45.94 MGEDSSNNRSNGGSRLAPPQAQAEHCVEIVHPVVPPPHRSGLQRLGNRLKETFFPDDPLRQFKGQSPARKWVIGAQYIFPILQWGPHYNLRLFKSDVVAGLTIASLAIPQGISYAKLANLPPIVGLYSSFVPPLVYAVLGSSRDLAVGPVSIASLILGSMLRQEVSPIKDPILFLQLGFTSTFFAGLFQASLGFLRLGFIIDFLSKATLIGFMAGAAIIVSLQQLKGLLGITHFTKQMGLIPVLSSVFHQTHEWSWQTILMGFCFLLFLLITRHISMKRPKLFWISAGAPLVSVILSTILVFAFKADRHGISIIGKLQQGLNPPSWNMLRLQGSHLGLVIKTGLVTGIISLTEGIAVGRTFAAIKDYRVDGNKEMIAIGLMNVVGSFTSCYVTTGAFSRSAVNHNAGAKTAVSNIIMSVTIMVTLLFLMPLFQYTPNLVLAAIIVTAVVGLIDVPAAYSIWKVDKFDFVVMLCAFFGVILISVQHGLAIAVGISIFKIILQITRPKTVMLGNIPGTDIYRNLDHYKDAMSVQGFLILSIEAPINFANTTYLNERILRWIEDYEAEDFVKKEGSRLQFVILELSAVSAIDTSGVLLFKDLRRALEKKDVELVLVNPLGEVLEKLQKADENQEILRTNNVFLTVGEAIASLSATMKGQSSSI 660
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 35675300 35686086 + Tan0004766.1 Tan04g1667 750071
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan04g1667 660 MobiDBLite consensus disorder prediction 1 21 - -
Tan04g1667 660 CDD STAS_SulP_like_sulfate_transporter 525 642 - -
Tan04g1667 660 PANTHER SULFATE TRANSPORTER 54 647 IPR001902 GO:0005887(PANTHER)|GO:0016020(InterPro)|GO:0055085(InterPro)
Tan04g1667 660 ProSitePatterns SLC26A transporters signature. 122 143 IPR018045 GO:0008271(InterPro)|GO:0008272(InterPro)
Tan04g1667 660 MobiDBLite consensus disorder prediction 1 17 - -
Tan04g1667 660 NCBIfam sulfate permease 80 645 IPR001902 GO:0016020(InterPro)|GO:0055085(InterPro)
Tan04g1667 660 FunFam Sulfate transporter 31 504 652 - -
Tan04g1667 660 Pfam Sulfate permease family 93 473 IPR011547 GO:0016020(InterPro)
Tan04g1667 660 Gene3D STAS domain 504 652 IPR036513 -
Tan04g1667 660 ProSiteProfiles STAS domain profile. 524 649 IPR002645 -
Tan04g1667 660 SUPERFAMILY SpoIIaa-like 530 649 IPR036513 -
Tan04g1667 660 Pfam STAS domain 528 645 IPR002645 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan04g1667 Tan-Chr4:35675300 Tan06g1013 Tan-Chr6:8941271 9.10E-209 dispersed
Tan04g1667 Tan-Chr4:35675300 Tan04g1668 Tan-Chr4:35675300 0.00E+00 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan04g1667 K17471 - csv:101219163 1144.8