Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan04g1702 ATGAGTATGAAGATGCAGCAGAGCCATCACTCAGTGGCTGTGAGGTATAATGAGCAAATTGGGAGCAAAAAAGGGGTCACATTCATTCAAGCCAACAGAGCTTGGCTTCCTAAGTTTTTGCTGCTTTGGGTTCTGTTGGTGGCATGCATTAGTATGCTGATCTATAAGGGAATGGATGCTGACAACAAAGTTAGAAGGAGGGAAGTTTTGGGGAGCATGTGTGACCAGAGAGCAAGGATGCTTCAGGATCAATTCAGTGTCAGTGTCAACCATGTCCATGCTTTGGCTATTCTCATTTCCACTTTCCACTACTTCAAGAACATATCGGCAATCGATCAGGAAACTTTTGCTGAGTACACAGCCAGAACTGCTTTCGAGCGGCCTTTGCTTAGTGGTGTGGCGTTTGCACAAAGAGTGGTGCACTCAGAGCGAGAGAAATTTGAGAAGCAACATGGGTGGACCATAAAAACAATGGAAAGGGAACCATCACCTACAAGGGATGAATATGCGCCAGTCATATTTTCGCAGGAAACTGTTTCCTACATTGAATCTCTTGATATGATGTCTGGAGAGGAGGACCGCGAAAACATTTTGAGGTCAAGAGAAACAGGTAAAGCTGTTTTAACGAGCCCTTTCAGGCTACTGGGTTCTCATCATCTTGGAGTCGTGCTGACGATCCCTGTTTATAAAACCAAGCTTCCTGCAAATCCAACTATGGATGAGCGAACTCGAGCAACGGCAGGATACCTTGGTGGAGCATTTGATGTGGAATCACTTGTGGAAAATTTACTTGGCCAACTTGCTGGAAATCAGGCCATTTTGGTGAATGTATATGATATCACGAACTATTCCGATCCCCTAGTAATGTATGGTCATCAATATGAAGATGGTGACATGTCTCTTTTGCATGAGAGCAAACTAGATTTTGGAGATCCATTTAGGAAGCATCAGATGATATGCAGATATCATCAGAAAGCACCGACATTATGGACAGCACTTACTACTGCGTTCTTATTCTTTGTGATTGGATTGTTAGTGGGATACATCTTATATGGTGCAGCAACTCATATTGTTAAAGTTGAAGATGATTTCCATGAAATGCAAGAACTGAAAGTTCGAGCTGAAGCTGCTGATGTTGCAAAATCTCAGTTTCTCGCCACTGTCTCTCATGAAATCAGGACACCCATGAATGGCATCCTTGGAATGCTTGCTTTACTTCTCGATACGGAATTGAGTTCAACTCAAAGGGATTATGCTCAAACGGCTAAGGCCTGTGGAAAAGCACTGATAGCGTTAATAAATGAGGTGCTTGACCGGGCGAAAATTGAAGCTGGGAAGTTAGAGCTTGAAGCGGTTTCTTTTGACCTTAGATTAATACTAGATGATGTTCTGTCTTTGTTTTCTGAAAAGTCAAGGCACAAGGGAGTAGAGTTGGCAGTATTTGTTTCGGACAAAGTTCCTGAAATAGTTATGGGGGATCCCGGAAGGTTCAGACAAGTAATCACAAATCTTGTGGGTAACTCTGTAAAATTCACAGAACAAGGGCATATATTCGTCAAAGTTCAATTAGCTGAACAATCAATGACCTCTACGAATATCAAATCTGAAACTCATATGAATGGAAACTTAGATGATGGTGCATCATACCATAAACATCAGTTTGAAACCTTGAGTGGATGTGAGGCAGCTGATAACCAAAACAGTTGGGACACTTTTAAGCATCTTATTGCACATGAGGAATTCCGACCAAACACTTCAAGCAATTTTATGGCTATGAATGAAAGTTCTGATATTGTTACTGTCATGATATCTGTGGAAGATACGGGAATCGGGATTCCGTTATGTGCCCAAGGTCGAGTTTTTATGCCCTTCATGCAAGCAGATAGCTCAACCTCCAGAAACTATGGTGGAACTGGTATTGGCTTAAGCATCAGTAAGTGTCTGGTTGAATTAATGGGCGGTCAGATAAACTTTGTAAGCCGGCCTCAGGTTGGAAGCACATTCTCATTCACTGCTGTTTTTGGGAAATGTGAGAAGAAAGCGACAATCGACATCAAAAAGTCTAATTTGGAGGAACTCCCTTCTGCATTTAGAGGACTGAAAGCTGTCATAGTCGATGGGAAACCAGTTAGAGCTGCTGTGACCAAATACCATTTGAAGAGACTTGGCATCCTGGTTGAAATTGCCAGTAGTGTCAAGAAGGCTGCTGCTTTATGGGGAAAAAACGGCTCTGTTAGATCAAGTAGTATCTTTCAGCCCGACGTAATTCTTCTCGAGAAAGATATCTTTATTTCAAATGAGGAATGTGGTTCTTCTAATCTACTTCATCAACTAGACTGGAAGCAGAATGGTCATGCCTTTAAGTTTCCGAAATTAATCCTTCTCGCGACCAGCATAAGCACAGCTGAATTTGATAAAGCAAAGGAAGCAGGTTTTTCGGACACCTTGATCATGAAACCACTGAGAGCAAGCATGATAGGTGCATGTCTTCAACAGGTGCTCGGCTCGGGAAAGAAACGGCAGCTTGGGAGGGGCATGGCTAATGGCTCTAACTTTCTTAGAGGGCTCCTCTGTGGCAAGAAGATATTGGTTGTTGATGACAATATGGTAAATCGGAGAGTCGCTGCAGGTGCTTTGAAGAAATTCGGTGCTGATGTAGAGTGTGCTGATAGCGGAAAAGCTGCACTTGCATTGCTTCAACTTCCACACAGTTTTGATGCTTGCTTTATGGATATTCAGATGCCAGAAATGGATGGATTCGAAGCGACCCGAAGAATCAGGCTGATGGAGAGCATGGAAAATGAGGTACTGATTAGAGAATCTGGTGGGAAAGAAAATGCAAGGAAAGATGAGTGGCATGTTCCAATATTAGCCATGACCGCAGACGTAATTCACGCAACGTACGACGAGTGCCTGAAAAGTGGGATGGATGGATACGTATCAAAGCCGTTCGAGGAAGAGAATCTTTACGAGGCAGTTTCCAAGTTTTTCAAATCAAAGACCATCACGGATTGA 3015 42.85 MSMKMQQSHHSVAVRYNEQIGSKKGVTFIQANRAWLPKFLLLWVLLVACISMLIYKGMDADNKVRRREVLGSMCDQRARMLQDQFSVSVNHVHALAILISTFHYFKNISAIDQETFAEYTARTAFERPLLSGVAFAQRVVHSEREKFEKQHGWTIKTMEREPSPTRDEYAPVIFSQETVSYIESLDMMSGEEDRENILRSRETGKAVLTSPFRLLGSHHLGVVLTIPVYKTKLPANPTMDERTRATAGYLGGAFDVESLVENLLGQLAGNQAILVNVYDITNYSDPLVMYGHQYEDGDMSLLHESKLDFGDPFRKHQMICRYHQKAPTLWTALTTAFLFFVIGLLVGYILYGAATHIVKVEDDFHEMQELKVRAEAADVAKSQFLATVSHEIRTPMNGILGMLALLLDTELSSTQRDYAQTAKACGKALIALINEVLDRAKIEAGKLELEAVSFDLRLILDDVLSLFSEKSRHKGVELAVFVSDKVPEIVMGDPGRFRQVITNLVGNSVKFTEQGHIFVKVQLAEQSMTSTNIKSETHMNGNLDDGASYHKHQFETLSGCEAADNQNSWDTFKHLIAHEEFRPNTSSNFMAMNESSDIVTVMISVEDTGIGIPLCAQGRVFMPFMQADSSTSRNYGGTGIGLSISKCLVELMGGQINFVSRPQVGSTFSFTAVFGKCEKKATIDIKKSNLEELPSAFRGLKAVIVDGKPVRAAVTKYHLKRLGILVEIASSVKKAAALWGKNGSVRSSSIFQPDVILLEKDIFISNEECGSSNLLHQLDWKQNGHAFKFPKLILLATSISTAEFDKAKEAGFSDTLIMKPLRASMIGACLQQVLGSGKKRQLGRGMANGSNFLRGLLCGKKILVVDDNMVNRRVAAGALKKFGADVECADSGKAALALLQLPHSFDACFMDIQMPEMDGFEATRRIRLMESMENEVLIRESGGKENARKDEWHVPILAMTADVIHATYDECLKSGMDGYVSKPFEEENLYEAVSKFFKSKTITD 1004
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 37649833 37658929 - Tan0000067.1 Tan04g1702 750106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan04g1702 1004 ProSiteProfiles Histidine kinase domain profile. 387 676 IPR005467 -
Tan04g1702 1004 SMART HisKA_10 380 445 IPR003661 GO:0000155(InterPro)|GO:0007165(InterPro)
Tan04g1702 1004 FunFam Histidine kinase 4 352 443 - -
Tan04g1702 1004 Gene3D - 695 838 - -
Tan04g1702 1004 Gene3D - 856 1004 - -
Tan04g1702 1004 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 600 671 IPR003594 -
Tan04g1702 1004 Gene3D - 444 679 IPR036890 -
Tan04g1702 1004 SUPERFAMILY CheY-like 859 997 IPR011006 -
Tan04g1702 1004 SMART HKATPase_4 492 676 IPR003594 -
Tan04g1702 1004 FunFam Histidine kinase 4 111 326 - -
Tan04g1702 1004 ProSiteProfiles Response regulatory domain profile. 861 997 IPR001789 GO:0000160(InterPro)
Tan04g1702 1004 SMART REC_2 860 993 IPR001789 GO:0000160(InterPro)
Tan04g1702 1004 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 434 671 IPR036890 -
Tan04g1702 1004 Pfam CHASE domain 110 290 IPR006189 -
Tan04g1702 1004 ProSiteProfiles Response regulatory domain profile. 701 834 IPR001789 GO:0000160(InterPro)
Tan04g1702 1004 Pfam His Kinase A (phospho-acceptor) domain 380 445 IPR003661 GO:0000155(InterPro)|GO:0007165(InterPro)
Tan04g1702 1004 Gene3D CHASE domain 111 326 IPR042240 -
Tan04g1702 1004 CDD HisKA 380 441 IPR003661 GO:0000155(InterPro)|GO:0007165(InterPro)
Tan04g1702 1004 SMART CHASE_2 107 292 IPR006189 -
Tan04g1702 1004 CDD HATPase_EvgS-ArcB-TorS-like 497 674 - -
Tan04g1702 1004 FunFam Histidine kinase 3 855 1001 - -
Tan04g1702 1004 ProSiteProfiles CHASE domain profile. 107 319 IPR006189 -
Tan04g1702 1004 PANTHER TWO-COMPONENT HISTIDINE KINASE 29 997 IPR050956 -
Tan04g1702 1004 PRINTS Bacterial sensor protein C-terminal signature 619 629 IPR004358 GO:0016310(InterPro)|GO:0016772(InterPro)
Tan04g1702 1004 PRINTS Bacterial sensor protein C-terminal signature 601 615 IPR004358 GO:0016310(InterPro)|GO:0016772(InterPro)
Tan04g1702 1004 PRINTS Bacterial sensor protein C-terminal signature 660 673 IPR004358 GO:0016310(InterPro)|GO:0016772(InterPro)
Tan04g1702 1004 PRINTS Bacterial sensor protein C-terminal signature 636 654 IPR004358 GO:0016310(InterPro)|GO:0016772(InterPro)
Tan04g1702 1004 Gene3D - 58 110 - -
Tan04g1702 1004 Coils Coil 430 450 - -
Tan04g1702 1004 Gene3D - 353 443 - -
Tan04g1702 1004 Pfam Response regulator receiver domain 862 993 IPR001789 GO:0000160(InterPro)
Tan04g1702 1004 CDD REC_hyHK_CKI1_RcsC-like 862 993 - -
Tan04g1702 1004 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 366 446 IPR036097 GO:0000155(InterPro)|GO:0007165(InterPro)
Tan04g1702 1004 SUPERFAMILY CheY-like 697 835 IPR011006 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan04g1702 Tan-Chr4:37649833 Tan11g1724 Tan-Chr11:17197435 0.00E+00 dispersed
Tan04g1702 Tan-Chr4:37649833 Tan02g0457 Tan-Chr2:4297513 4.00E-272 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
27265 PF02518 HATPase_c 1.80E-31 CL0025 Tan TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan04g1702 K14489 - csv:101204531 1828.14