Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan04g1726 ATGGGGTCGCCGGAGCTTAATCCCCTTCCGCCACTTTCTCGGCGGAATTTTGCAGAAGATTATAGGAGAAATGGAGATGGTAACAGTAATGGCAACAATGACAATGGCTACGGCTACGGTTACGGCGACGACGATGATGAAGAATTCTTTTCGCCAAGAGGGTCTTCCGTCGGCGGGAAGGAGAATGTGGGAGGTACTAGAAGGTTGAGCCCTGTGAAGTTTTTTCAGAATGTGGAAAGTGAAAACTTCTTGAGGAAAAGCTATACTTCGAGTTTGAATTCTGGTTCTCGTTCAGTTTCTGTTCCTAATAGTCCTTCTCCGCCATTGATGTTGAGCCCCACGAGCTTGAGATCGAAGTCACCTGACTCTATTATTAGATTCCCAGTTCCTCTACGGCCATTACCGACGCGTCCAGTACCGCCGTCGCCGTCATTGTCCTCTGCTTCTTCGCCACCGGGAGGTTCGGGGAACACCAAGAACTCACCGTCGAGGGACTCCGATTTTTCAGAGTTGCATAGGCAGTTTTCAAATGGATTTGGAATGGATTACCAGCAGCCATCACCGGTGAAGCTGCCACCGCCTCCACCTCCGCCACCGCCACCTCCAATGTTTTGGGAGATTCCTCCATCTTCCTCCCTTCCCAATAAGGAGCCAAATCTAGGTCCACCAGTCCTTGCCGTGCCATCGGGACCGATTCTCTCACAGAACATGGCTCATATGTCAGTGGGGGAGCAATCAAACACCATTGGAGATGCAGAGAGAATGGAGGAAAATTCGAAGCCGAAACTGAAGCCATTACATTGGGACAAAGTTCGAACGAGCTCCGATCGAGCCATGGTGTGGGATCACATCAAGTCGAGTTCTTTTCAGTTGAATGAGGAAATGATTGAATCACTTTTTATGGTGAATAACAATAATTCTAATCTGATGAGCAAAGAAAATGGTGGAGTTCGTCAAATCATGCCTTTATTGAACCAAGAGAATCGAGTTCTTGATCCTAAGAAGTCTCAGAATATTGCTATTTTGTTGAGGGCTCTCAATGTCACCATTGAAGAAGTCTCTGAGGCCCTTTTGGAAGGAAATTCAGATACTTTGGGTACCGAACTGCTCGAAAGTTTACTAAAAATGGCGCCAACCGAAGAAGAAGAACGTAATTTGAGAGAATACAAAGATGATTCGCCTTTTAAACTTGGCCCAGCTGAGAAGTTTCTCAAGGTAGTTCTTGATGTACCTTTTGCATTCAAAAGGGTGGATGCAATGCTCTACATTGCCAATTTCGATTCTGAGATAGAGTACCTCGATCGGTCCTTCGAAACTCTTGAGGCTGCTTGTAAAGAATTGAAAAACAGCAGAATGTTTCTCAAACTTCTTGAAGCAGTACTCAAAACCGGGAACCGGATGAACGTAGGCACGAACCGAGGCGATGCTCATGCCTTTAAACTCGACACCCTTCTCAAGCTTGTCGACATCAAGGGCACCGATGGAAAGACCACTCTCTTGCATTTTGTAGTGCAGGAGATTATTAGATCTGAAGGATATCGACACTCCACCTCTTTTGATCACAACTTGACAGCGGATAAAACTCAACCATCTTCCTTAACAAACGACGTCGAGTTTCGAAAGCTCGGTCTTCAAGTCGTTTCGGGTCTTAGTAGGGAGCTCTCCAGTGTAAAAAAAGCTGCATTACTGGATGCAGATGTGCTTAGCAGTGACGTAGTGAAACTCGCTGGAGGGATCACAAAAGTCACTGAGGTCTTTAGATTAAACGAAGACATGTTGAAAGGAGGGAGTAGGTTGAATTTCTGTGACTCGATGAACAGGTTCTTAGGGAAGGCAGCTGAAGAAATAGCAAGGATACAAGTCCAAGAGGGCATTGTTCTGTCCATGGTAAAGGAAATAACCGAATACTTCCATGGCAACTTAGCTAAAGAAGAAGCTCGGCCACTGCGCATTTTCATGGTGGTAAAGGATTTTCTAGCAATCTTAGATCAGGTATGCAAGGAAGTCGGAAGAATCAACGAAAGAACAATAGTCGGTTCGGCTCGTCAATTTACGAGGCCTCCAAATCCGAGTCTTACATCAATTTTCCCTGGATTATGCGAAAGTCAGCGCTATGGATCGTCTGACGATGATAGCTCATCTTCCTCATCTTAG 2154 45.73 MGSPELNPLPPLSRRNFAEDYRRNGDGNSNGNNDNGYGYGYGDDDDEEFFSPRGSSVGGKENVGGTRRLSPVKFFQNVESENFLRKSYTSSLNSGSRSVSVPNSPSPPLMLSPTSLRSKSPDSIIRFPVPLRPLPTRPVPPSPSLSSASSPPGGSGNTKNSPSRDSDFSELHRQFSNGFGMDYQQPSPVKLPPPPPPPPPPPMFWEIPPSSSLPNKEPNLGPPVLAVPSGPILSQNMAHMSVGEQSNTIGDAERMEENSKPKLKPLHWDKVRTSSDRAMVWDHIKSSSFQLNEEMIESLFMVNNNNSNLMSKENGGVRQIMPLLNQENRVLDPKKSQNIAILLRALNVTIEEVSEALLEGNSDTLGTELLESLLKMAPTEEEERNLREYKDDSPFKLGPAEKFLKVVLDVPFAFKRVDAMLYIANFDSEIEYLDRSFETLEAACKELKNSRMFLKLLEAVLKTGNRMNVGTNRGDAHAFKLDTLLKLVDIKGTDGKTTLLHFVVQEIIRSEGYRHSTSFDHNLTADKTQPSSLTNDVEFRKLGLQVVSGLSRELSSVKKAALLDADVLSSDVVKLAGGITKVTEVFRLNEDMLKGGSRLNFCDSMNRFLGKAAEEIARIQVQEGIVLSMVKEITEYFHGNLAKEEARPLRIFMVVKDFLAILDQVCKEVGRINERTIVGSARQFTRPPNPSLTSIFPGLCESQRYGSSDDDSSSSSS 717
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 42192022 42196549 + Tan0008794.1 Tan04g1726 750130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan04g1726 717 SMART it6_source 253 677 IPR015425 -
Tan04g1726 717 PANTHER FORMIN-RELATED 81 711 IPR027643 GO:0003779(InterPro)|GO:0030036(InterPro)|GO:0045010(InterPro)|GO:0051015(InterPro)
Tan04g1726 717 MobiDBLite consensus disorder prediction 73 121 - -
Tan04g1726 717 SUPERFAMILY Formin homology 2 domain (FH2 domain) 192 675 - -
Tan04g1726 717 ProSiteProfiles Formin homology-2 (FH2) domain profile. 253 688 IPR015425 -
Tan04g1726 717 MobiDBLite consensus disorder prediction 148 164 - -
Tan04g1726 717 Pfam Formin Homology 2 Domain 256 662 IPR015425 -
Tan04g1726 717 Gene3D Formin, FH2 domain 252 672 IPR042201 -
Tan04g1726 717 MobiDBLite consensus disorder prediction 1 203 - -
Tan04g1726 717 MobiDBLite consensus disorder prediction 187 203 - -
Tan04g1726 717 MobiDBLite consensus disorder prediction 131 147 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan04g1726 Tan-Chr4:42192022 Tan07g2065 Tan-Chr7:72130335 1.70E-168 dispersed
Tan04g1726 Tan-Chr4:42192022 Tan01g4501 Tan-Chr1:110637190 7.80E-97 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan04g1726 K28090 - csv:101213912 1053.51