Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan04g1751 ATGGGTCTTCATATCTTCTTGTTCATCCTTCTACCCATCTCTTTCTTCTTCCAATTCCGTCTCTCCCTTTCCCAGAACCCCACAATTTGTCATTCCGATGATTCCAGGACCTTGCAGGACTTCCACAGAGCTTTTGATCCCCAAATCGACGGATGGCACACCAACTGTTCGACCAATTGCTGCACTTGTATTGGTCTCACTTGTGACTCTTCTGGGCGGGTTGTGAGGATGGAGCTTGCTGGGAAAAAGCTTAAGGGTCAATTACCAAACTCAATTGCAAGATTGGAGCACCTCAGAGTTCTCAATCTTTCTTCTAATTTTCTCAGTGGGTCGATACCCCTGGCTCTGTTTCATCTCCCATACTTGGAAGTTCTCGATCTCAGCTTCAATGATTTCGTTGGGACCATCTCAACAGGTACCATTAATTTGCCTTCCATCCGGGTTCTTAATGTTTCTCATAATTCCTTTAATGGTAGTCTTCCACTTGGGGTTTGTGTTAACTCCTCTAGAATTGAGATTCTCAATCTGGGTTTCAATCGTTTCTTTGGTCTGTTTCCTTTTGAACTTGCTGAATGTGTTTCCTTGAAGAGACTGTTTGTGGAATCGAATTTTATCAGTGGTGGGATACCTGATGAGGCTTCTAGATTGAGGAAATTGACCCATTTTTGTGTTCAGAATAACAAGCTTTCTGGTCCTTTGAATGGTGTTGTTGGGAATCTCACAAGCCTTGTTCGGTTGGATTTGTCATCTAATGGGTTTTTTGGAGAAATCCCTGATGTTTTTTACAACTCTATGGATTTGAGTTACGTTGTTGCTGAGTCCAATAGGTTTAGTGGGAAGATTCCCAATTCTTTGTCGAACTCTGCTTCACTCACAGTCCTAAATTTGAGGAACAATTCAATAGAGGGAACTCTTGATCTCAACTGTTCAGCAATGACAAGCCTGGTTACACTTGATTTAGGCACTAATAGGTTTCATGGCTCTATACCAAGTAATCTTCCCTCTTGTACTCAACTGAGAAGTATAAACCTTGCTAGGAATAACCTCCGCGGTCAGATCCCCGAAAGCTTTAGGAATTTTCAGAGCCTCTCTTATTTATCACTTACGAATACGAGCATTGTTAATGTTTCGTCTGCTCTTAACATCTTGCAACATTGCCAGAATTTGAGTACTGTGGTCCTTACCTTTAACTTCCGTGGTGAAGTGTTGGAAGATGATCCTAACTTGCATTTTAAGAGGCTCCAAGTTTTGATAATTGCTAATTGTGGATTGAAGGGAATCATACCCCAGTGGTTGAGAGGTTCCAAGGAGTTGCAGTTGTTGGATTTATCATGGAACCGTCTCAAGGGAACTATTCCGCCCTGGTTTGGCAGGTTTCAGTCCTTGTTTTACTTGGATTTATCTAATAATTCGTTCACTGGAGATATCCCGAAAGAGATGACTGAAGTGAGGAGTTTCATTGACAGAAACTTCTCACTCAATGAAACTTCCTCACTAGATTTTTCCCTTTTCTTGAAAAAAAATGGAACTGGATTGCAGTACAATCAAGTGTGGAGGTTTCCACCCACTTTGAACCTCAGTCTCAACAATCTCAGTGGGCCAATCTGGACAGAGTTTGGAAATCTTAAGAAGATTCTAGTTCTTGATCTGAAAATCAACAGTTTGTCGGGAACAATTCCGGGCAGCCTCTCTGGGATGGTTAGCTTAGAGACACTGGATCTTTCTCACAACAATCTTTCAGGAATAATTCCGCCTTCACTGCAAAATCTCAATTTTTTGTCTAAGTTCAATGTTGCATACAATCAATTACATGGAGCAATTCCTGAAGGAGGTCAGTTTCATAGCTTTGATAACTCTAGCTTTGAAGGAAATGATTTTTGCGTCCGAGATGGTGTCTGTGCATCAAGTGATCCTCTTGTACCATCCCACAAATCAAGAATGGTTATAAGGACTATTATAGGTATGGTATTCGGAATAATGTTTGGAATAATGTTTCTTGTAACTCTCGTGGTTGTGTTTATGCTTCGGGCTCCCCGGGGAAGAGTTGGAGATCCTGAAAATGAAGTGTCTAACACTGATGATAATGACTTGGAGGAATCCAAAGCAGGATTGGTAGTTTTGTTCCAAAACAATAACAATGGAAGTCTCTCGCTGGATGACATTTTGAAATCGACGAATGACTTTGATCAAGAAAATATCATCGGATGTGGGGGTTTTGGTTTAGTTTACAAAGCAACCCTTCCTGGCGGTAGAAATGTTGCAATAAAACGGTTGTCTGGTGATTGTTGTCAAATGGACAGAGAATTTCGAGCAGAAATTGAAACACTCTCAGGCGCGCAGCATCCGAATCTTGTTCTTCTTCAGGGGTATTGTATGTATAAAAATGACAGGCTTCTGATTTACTCCTTCATGGAGAATGGTAGCTTAGATTACTGGTTACATGAAAAACCCGATGGCCCGTCTTGCCTTGATTGGGATACCAGACTGCAGATTGCTCGGGGGGCTGCTGCGGGGCTAGCTTATTTGCATCAATCCTGTGAACCCCATATCCTCCATCGAGATATAAAGTCGAGTAACATTCTTTTAGACAAAAACCTTAAAGCTCATTTAGCCGATTTTGGCCTTGCGAGACTCATTCTTCCCTATGATTCTCATGTAACAACCGATCTTGTCGGTACGCTGGGATATATTCCACCTGAGTACGGGCAATCCTCAGTGGCAACTTACAAAGGGGATATATATAGTTTTGGAGTCGTTCTATTAGAGCTTTTGACTGGTAAAAGGCCAATTGATATGTGCAGACCGAAAGGACTACGAGACTTGATCTCTTGGGTGTTCCAAATGAGGAAAGACAGAAAAGTAAGTGAGGTGTTCGATCCATTATTATACGAGAAGCAGCACGAGACAGCGATGACTGAAGTTCTTGATATAGCTTGCCTTTGCTTATGTAAGTTACCCAAAGAGAGGCCTTCAACTCAACATCTAGTTTCTTGGCTTGATAAAGGGATTGATTCCTAG 3018 41.68 MGLHIFLFILLPISFFFQFRLSLSQNPTICHSDDSRTLQDFHRAFDPQIDGWHTNCSTNCCTCIGLTCDSSGRVVRMELAGKKLKGQLPNSIARLEHLRVLNLSSNFLSGSIPLALFHLPYLEVLDLSFNDFVGTISTGTINLPSIRVLNVSHNSFNGSLPLGVCVNSSRIEILNLGFNRFFGLFPFELAECVSLKRLFVESNFISGGIPDEASRLRKLTHFCVQNNKLSGPLNGVVGNLTSLVRLDLSSNGFFGEIPDVFYNSMDLSYVVAESNRFSGKIPNSLSNSASLTVLNLRNNSIEGTLDLNCSAMTSLVTLDLGTNRFHGSIPSNLPSCTQLRSINLARNNLRGQIPESFRNFQSLSYLSLTNTSIVNVSSALNILQHCQNLSTVVLTFNFRGEVLEDDPNLHFKRLQVLIIANCGLKGIIPQWLRGSKELQLLDLSWNRLKGTIPPWFGRFQSLFYLDLSNNSFTGDIPKEMTEVRSFIDRNFSLNETSSLDFSLFLKKNGTGLQYNQVWRFPPTLNLSLNNLSGPIWTEFGNLKKILVLDLKINSLSGTIPGSLSGMVSLETLDLSHNNLSGIIPPSLQNLNFLSKFNVAYNQLHGAIPEGGQFHSFDNSSFEGNDFCVRDGVCASSDPLVPSHKSRMVIRTIIGMVFGIMFGIMFLVTLVVVFMLRAPRGRVGDPENEVSNTDDNDLEESKAGLVVLFQNNNNGSLSLDDILKSTNDFDQENIIGCGGFGLVYKATLPGGRNVAIKRLSGDCCQMDREFRAEIETLSGAQHPNLVLLQGYCMYKNDRLLIYSFMENGSLDYWLHEKPDGPSCLDWDTRLQIARGAAAGLAYLHQSCEPHILHRDIKSSNILLDKNLKAHLADFGLARLILPYDSHVTTDLVGTLGYIPPEYGQSSVATYKGDIYSFGVVLLELLTGKRPIDMCRPKGLRDLISWVFQMRKDRKVSEVFDPLLYEKQHETAMTEVLDIACLCLCKLPKERPSTQHLVSWLDKGIDS 1005
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 46525028 46538120 - Tan0016917.1 Tan04g1751 750155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan04g1751 1005 Gene3D Ribonuclease Inhibitor 311 633 IPR032675 -
Tan04g1751 1005 Pfam Leucine rich repeat 413 471 IPR001611 GO:0005515(InterPro)
Tan04g1751 1005 Pfam Leucine rich repeat 523 579 IPR001611 GO:0005515(InterPro)
Tan04g1751 1005 Pfam Leucine rich repeat 89 132 IPR001611 GO:0005515(InterPro)
Tan04g1751 1005 SUPERFAMILY Protein kinase-like (PK-like) 713 999 IPR011009 -
Tan04g1751 1005 FunFam Leucine-rich repeat receptor-like protein kinase 804 1005 - -
Tan04g1751 1005 SUPERFAMILY L domain-like 32 232 - -
Tan04g1751 1005 SUPERFAMILY L domain-like 169 495 - -
Tan04g1751 1005 ProSiteProfiles Leucine-rich repeat profile. 568 591 IPR001611 GO:0005515(InterPro)
Tan04g1751 1005 SUPERFAMILY L domain-like 512 627 - -
Tan04g1751 1005 PRINTS Leucine-rich repeat signature 566 579 - -
Tan04g1751 1005 PRINTS Leucine-rich repeat signature 438 451 - -
Tan04g1751 1005 ProSitePatterns Serine/Threonine protein kinases active-site signature. 850 862 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan04g1751 1005 PANTHER RECEPTOR-LIKE PROTEIN 55 376 998 - -
Tan04g1751 1005 Gene3D Transferase(Phosphotransferase) domain 1 804 1003 - -
Tan04g1751 1005 ProSiteProfiles Protein kinase domain profile. 728 999 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan04g1751 1005 SMART serkin_6 728 999 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan04g1751 1005 FunFam Tyrosine-sulfated glycopeptide receptor 1 309 638 - -
Tan04g1751 1005 FunFam Leucine-rich repeat receptor protein kinase MSP1 690 803 - -
Tan04g1751 1005 Gene3D Ribonuclease Inhibitor 31 310 IPR032675 -
Tan04g1751 1005 Pfam Leucine Rich Repeat 242 263 IPR001611 GO:0005515(InterPro)
Tan04g1751 1005 Pfam Leucine Rich Repeat 338 360 IPR001611 GO:0005515(InterPro)
Tan04g1751 1005 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 214 305 - -
Tan04g1751 1005 Gene3D Phosphorylase Kinase; domain 1 688 803 - -
Tan04g1751 1005 Pfam Protein kinase domain 729 996 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan04g1751 1005 ProSitePatterns Protein kinases ATP-binding region signature. 734 756 IPR017441 GO:0005524(InterPro)
Tan04g1751 1005 SMART LRR_typ_2 143 167 IPR003591 -
Tan04g1751 1005 SMART LRR_typ_2 240 263 IPR003591 -
Tan04g1751 1005 SMART LRR_typ_2 95 119 IPR003591 -
Tan04g1751 1005 SMART LRR_typ_2 312 336 IPR003591 -
Tan04g1751 1005 SMART LRR_typ_2 566 589 IPR003591 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan04g1751 Tan-Chr4:46525028 Tan04g0926 Tan-Chr4:8051596 1.50E-69 dispersed
Tan01g0270 Tan-Chr1:2279391 Tan04g1751 Tan-Chr4:46525028 4.30E-77 transposed
Tan01g0823 Tan-Chr1:7959019 Tan04g1751 Tan-Chr4:46525028 1.40E-123 transposed
Tan03g1376 Tan-Chr3:70266695 Tan04g1751 Tan-Chr4:46525028 7.70E-65 transposed
Tan06g0493 Tan-Chr6:3698517 Tan04g1751 Tan-Chr4:46525028 1.80E-132 transposed
Tan11g0560 Tan-Chr11:4903226 Tan04g1751 Tan-Chr4:46525028 1.30E-55 transposed
Tan11g1679 Tan-Chr11:16202944 Tan04g1751 Tan-Chr4:46525028 2.50E-31 transposed
Tan11g1708 Tan-Chr11:16748592 Tan04g1751 Tan-Chr4:46525028 8.40E-69 transposed
Tan01g3014 Tan-Chr1:74779917 Tan04g1751 Tan-Chr4:46525028 1.10E-24 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67466 PF00069 Pkinase 9.50E-44 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan04g1751 K27625 - csv:116404121 1611.66