Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan04g1752 ATGGCAATGTCTGGAGTATTCATTGTTGCTGCGCCTGCGATGATGTTGTTGGTTTTGGGTATAGCTTGTGATGCCCAACTTTCGTCTGCATTTTACGACCAAACTTGTCCCACCGCACTGAATACCATTAGAAGTGTTGTTAGACAAGCTGTTTCTCAAGAGCGTCGAATGGCTGCTTCTCTCATTCGCCTCCATTTTCACGACTGCTTTGTTCAGGGCTGTGATGCCTCAATATTGCTTAACGATACTCCCTCCATGATTGGCCAACAAAATGCAGCGCCCAATAGAAACTCTGCTCGAGGTTATGGAGTGATTCATAAGGCTAAGACTGAAGTTGAGAACATATGTCCCGGCCTCGTGTCTTGTGCTGACATTCTTTCTGTAGCTGCAAGAGATGCATCTTTTTCGGTCGGTGGTCCATCTTGGTCGGTAAAGCTTGGAAGAAGAGATTCCACCACTGCAAGCAAATCCCTTGCAGAAAGCGAGCTTCCACACTTCCAAGAAAGCCTTGATAGACTAATTTCCATTTTTGCAAATAAAGGTCTCACTGCAAGAGATATGGTTGCATTATCAGGTTCTCACACTATAGGACAAGCTCAATGCTTTCTTTTCCGAAATAGGATATACAACCAAAGTAATATTGATGAAGGATTTGCGAAAACTCGTCGTAGAAATTGTCCCACATCGGATAATGGAAATGGAAATTTGGCACCACTTGATTTGGTCACACCCAATTCGTTTGACAATAACTATTTCAAAAATCTTATTCAAAGGAAGGGATTGCTTGAAACAGACCAAGTTCTATTTAATGGAGGATCCACTGACGATAATATTGTCACAGAATACAGTAGGAATCCAACCATTTTTAAATCTGATTTTGCAGCTGCAATGATTAAAATGGGAGATATCCAACCGCTCACTGGTTTACAAGGACAAATTAGAAATATTTGTGGAGCTGTCAACTAA 966 41.61 MAMSGVFIVAAPAMMLLVLGIACDAQLSSAFYDQTCPTALNTIRSVVRQAVSQERRMAASLIRLHFHDCFVQGCDASILLNDTPSMIGQQNAAPNRNSARGYGVIHKAKTEVENICPGLVSCADILSVAARDASFSVGGPSWSVKLGRRDSTTASKSLAESELPHFQESLDRLISIFANKGLTARDMVALSGSHTIGQAQCFLFRNRIYNQSNIDEGFAKTRRRNCPTSDNGNGNLAPLDLVTPNSFDNNYFKNLIQRKGLLETDQVLFNGGSTDDNIVTEYSRNPTIFKSDFAAAMIKMGDIQPLTGLQGQIRNICGAVN 321
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 46665973 46667320 - Tan0006651.1 Tan04g1752 750156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan04g1752 321 Gene3D Peroxidase, domain 2 164 300 - -
Tan04g1752 321 ProSitePatterns Peroxidases active site signature. 58 69 IPR019794 GO:0004601(InterPro)
Tan04g1752 321 FunFam Peroxidase 164 300 - -
Tan04g1752 321 PRINTS Haem peroxidase superfamily signature 58 72 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan04g1752 321 PRINTS Haem peroxidase superfamily signature 120 137 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan04g1752 321 PRINTS Haem peroxidase superfamily signature 186 201 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan04g1752 321 PRINTS Haem peroxidase superfamily signature 138 150 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan04g1752 321 PRINTS Haem peroxidase superfamily signature 240 255 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan04g1752 321 FunFam Peroxidase 30 179 - -
Tan04g1752 321 Pfam Peroxidase 43 284 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan04g1752 321 Gene3D - 31 317 - -
Tan04g1752 321 ProSiteProfiles Plant heme peroxidase family profile. 26 321 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan04g1752 321 PRINTS Plant peroxidase signature 60 80 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan04g1752 321 PRINTS Plant peroxidase signature 238 253 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan04g1752 321 PRINTS Plant peroxidase signature 295 308 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan04g1752 321 PRINTS Plant peroxidase signature 119 129 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan04g1752 321 PRINTS Plant peroxidase signature 254 271 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan04g1752 321 PRINTS Plant peroxidase signature 36 55 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan04g1752 321 PRINTS Plant peroxidase signature 185 197 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan04g1752 321 PRINTS Plant peroxidase signature 100 113 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan04g1752 321 PRINTS Plant peroxidase signature 138 153 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan04g1752 321 PANTHER PEROXIDASE 72-RELATED 15 319 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan04g1752 321 ProSitePatterns Peroxidases proximal heme-ligand signature. 186 196 IPR019793 -
Tan04g1752 321 SUPERFAMILY Heme-dependent peroxidases 26 321 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan04g1752 321 CDD secretory_peroxidase 26 320 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan04g1752 Tan-Chr4:46665973 Tan05g0534 Tan-Chr5:3713821 9.20E-98 dispersed
Tan11g0318 Tan-Chr11:2494991 Tan04g1752 Tan-Chr4:46665973 2.80E-99 transposed
Tan03g0044 Tan-Chr3:5475765 Tan04g1752 Tan-Chr4:46665973 1.40E-53 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan04g1752 K00430 - csv:116403992 541.191