Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan04g1849 ATGTCGCCTCTTGATTCTTCACGGGAGGAAAATGTTTACATGGCCAAGTTAGCTGAACAGGCTGAACGGTATGAGGAAATGGTAGAGTTCATGGAGAAAGTTGCCAAGACTGTGGATGTCGAGGAGCTGACTGTTGAGGAGAGGAATCTCCTCTCTGTTGCTTACAAGAATGTCATTGGGGCTCGGAGGGCCTCGTGGAGGATTATTTCTTCCATTGAGCAGAAGGAAGAGAGTCGGGGAAATGAGGACCATGTTGCAATTATCAAGGAGTACCGTGGCAAAATCGAAACCGAACTGAGCAAGATCTGTGATGGGATTTTGAGCCTACTTGAGTCTCATCTCATCCCATCGGCCTCATCTGCCGAGTCGAAGGTGTTTTATCTTAAAATGAAAGGTGACTACCACAGGTACCTGGCTGAGTTTAAGACCGGAGCTGAAAGGAAAGAAGCAGCGGAGAGCACATTATTAGCTTACAAGTCTGCTCAGGATATTGCTCTTGCTGAATTGGCTCCTACGCATCCAATTAGGCTAGGTCTTGCTCTTAACTTCTCAGTGTTTTATTATGAGATCCTTAATTCGCCAGACCGTGCTTGCAATTTGGCAAAGCAGGCTTTTGACGAAGCAATTTCTGAGCTTGACACATTGGGTGAAGAATCATACAAGGATAGCACCTTAATCATGCAACTCCTCCGAGACAACTTGACCCTTTGGACTTCCGATGTTGGGGATGAAGCTGGCGATGAGATTAAGGAAGCTTCAAAACGTGAATCAGGAGAGGGACATGGACAGTAG 792 46.34 MSPLDSSREENVYMAKLAEQAERYEEMVEFMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVAIIKEYRGKIETELSKICDGILSLLESHLIPSASSAESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDVGDEAGDEIKEASKRESGEGHGQ 263
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 57508121 57511135 - Tan0014747.2 Tan04g1849 750253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan04g1849 263 SMART 1433_4 8 251 IPR023410 -
Tan04g1849 263 FunFam 14-3-3 protein epsilon 4 251 - -
Tan04g1849 263 PRINTS 14-3-3 protein zeta signature 91 115 IPR000308 -
Tan04g1849 263 PRINTS 14-3-3 protein zeta signature 184 210 IPR000308 -
Tan04g1849 263 PRINTS 14-3-3 protein zeta signature 122 144 IPR000308 -
Tan04g1849 263 PRINTS 14-3-3 protein zeta signature 157 183 IPR000308 -
Tan04g1849 263 PRINTS 14-3-3 protein zeta signature 211 240 IPR000308 -
Tan04g1849 263 PRINTS 14-3-3 protein zeta signature 42 71 IPR000308 -
Tan04g1849 263 Pfam 14-3-3 protein 14 238 IPR023410 -
Tan04g1849 263 PIRSF 14-3-3 3 250 IPR000308 -
Tan04g1849 263 ProSitePatterns 14-3-3 proteins signature 1. 48 58 IPR023409 -
Tan04g1849 263 Coils Coil 14 34 - -
Tan04g1849 263 ProSitePatterns 14-3-3 proteins signature 2. 220 239 IPR023409 -
Tan04g1849 263 PANTHER 14-3-3 PROTEIN 7 243 IPR000308 GO:0005737(PANTHER)|GO:0007165(PANTHER)|GO:0034613(PANTHER)
Tan04g1849 263 SUPERFAMILY 14-3-3 protein 7 240 IPR036815 -
Tan04g1849 263 Gene3D - 2 251 IPR036815 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan04g1849 Tan-Chr4:57508121 Tan11g0576 Tan-Chr11:5115718 5.90E-10 dispersed
Tan04g1848 Tan-Chr4:57508121 Tan04g1849 Tan-Chr4:57508121 3.80E-142 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan04g1849 K06630 - csv:101222068 506.908