Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan04g1921 ATGCAGAAGCATGATGAGAGACATAAGATGATTAGTACAAATTCAAAAGAAGAGAATTCGCCTCCGAAACTAGCAGCAGCTTCGTCGAGCTCATCGGCGGCGACGCCATGGCTTAAGCTGAAGGATCCGAGGATCGTGCGCGTGTCGCGAGCTTTCGGAGGCAAGGATCGACACAGCAAAGTTTGTACCATAAGAGGACTGCGCGACCGGCGCGTTAGGCTTTCGGTTTCGACCGCAATTCAGCTCTATGATCTTCAAGACCGCCTCGGCCTTAACCAACCGAGCAAGGTCGTCGACTGGTTGCTCAATGCCGCCAAGGACGAAATCGACGAACTCCCTCCATTGCCAATCCCATCTTCAAGCCTCGGCCTTAACTATCAATCCATGCTACTACCTCACACTCAGACACACCCACATAGATCGAACGAGGACGACGAACAAAAGGAAAAGCAACAACACAAAACCAATTCTAATCCCTCTCAGCCTTCTTCTTTCTCAGCCCTTTTAAACAATGTGGCTGCCCCTCCATTTGGGTTTCATCATCATTGGGAGTCACCATCAACAAATCTTCCATTTTTTACATCTCAAGCTGAGGATCTTCATAACTTCAATAATGTCAATTTGTCTTTGCCTTCCCCTTTGTCCCTCTCCACTGGCTCTCAGTTTTTGGAGTTCAATCACTTGCATCAAAATTTCTTGATTAACTCAAATTCTCTTGCACTACATCCTTTCAACTCAATAAACCAACCGCCTCATGTTAGGCCTTTTCATTTCAGTATGGCTCCCAAATTCGTTTCTCAAGACAAGATCAACAACAATGGAGATCGACCAAATAAGGATGATGGCTTTGGTTCTGATGAATGA 864 46.06 MQKHDERHKMISTNSKEENSPPKLAAASSSSSAATPWLKLKDPRIVRVSRAFGGKDRHSKVCTIRGLRDRRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLNAAKDEIDELPPLPIPSSSLGLNYQSMLLPHTQTHPHRSNEDDEQKEKQQHKTNSNPSQPSSFSALLNNVAAPPFGFHHHWESPSTNLPFFTSQAEDLHNFNNVNLSLPSPLSLSTGSQFLEFNHLHQNFLINSNSLALHPFNSINQPPHVRPFHFSMAPKFVSQDKINNNGDRPNKDDGFGSDE 287
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 64897482 64899509 + Tan0018905.2 Tan04g1921 750325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan04g1921 287 MobiDBLite consensus disorder prediction 15 34 - -
Tan04g1921 287 MobiDBLite consensus disorder prediction 1 34 - -
Tan04g1921 287 MobiDBLite consensus disorder prediction 134 167 - -
Tan04g1921 287 Pfam TCP family transcription factor 54 157 IPR017887 -
Tan04g1921 287 MobiDBLite consensus disorder prediction 267 287 - -
Tan04g1921 287 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 12 229 IPR005333 GO:0003700(InterPro)|GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0043565(PANTHER)|GO:2000032(PANTHER)
Tan04g1921 287 MobiDBLite consensus disorder prediction 273 287 - -
Tan04g1921 287 MobiDBLite consensus disorder prediction 137 153 - -
Tan04g1921 287 ProSiteProfiles TCP domain profile. 54 112 IPR017887 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan04g1921 Tan-Chr4:64897482 Tan09g2038 Tan-Chr9:70901698 1.30E-31 dispersed
Tan04g1920 Tan-Chr4:64897482 Tan04g1921 Tan-Chr4:64897482 3.30E-147 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
27287 PF03634 TCP 2.50E-29 No_clan Tan TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan04g1921 - - - 0.0