Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan04g1958 ATGGATTCCCCAAATTTCTTCTTCCTTCTGTTTTTTTCCTTTTCCCTTCTCTTCGTCATCTTTGGGAATCCGTTCGATTTTGATTTATACAACTCCTGCAGCAATCACTTCAACTGCGGCGATATCAACCACGTCGGCTTCCCGTTCTGGGGCGACGGCCGACCCCCCGGCTGTGGCCATCCGGCGCTCAAATTGGCCTGCCAAGGAAGAAATACGACTATCGTAATAAAGGAAGTCAAATATCAGATTCTCAAATTCGATAACGATTCCCTAACGCTCACCATCGCCAGAGCTGATTACATGGACGACCTCTGCCCTAACAAATTCATCAACACCACAATCGATTACAATCTCTTCGATGTCATTCCTAATAATCGAAACATTACCTTGATCTATTGCTCGTCTTCTCCCATCGCCGGACAATTTAGGTGTCCTGATTATGAATTCGGCTTCATTCAGGCGACGCCCGTCGTCCCTAGTCTCTGCAATGTGAGCGTAATCGTGCCGGTTTCTTTGGATTTTTTCCCCCCGGTGAGCGATGTTGTGAACTCTACGGAGGTATGGACGGCCATTAAAGACGGATTCGAGGTGAGATTGAAGGAGGACGACCATGGATGTGAAATTTGTGAGGAGTCGGAGGGGGTTTGCGGTTACGATTGGAGTTCAAATCAGACGACTTGCTATTGTCGCTACGGTGCTTATAGGGATAACGGTGCTTGTCGGAGTCTGCCGGCCGGTGGAGGTCCGGCGTCTGCTCCGGGTGGGAATGACTCTAAGAAAACACACCTATTAATAGGTCTTTCTGTTGGAGGGGCAACTGTATTAGGCCTATGCCTAGGATGCTGCGTCTTCTATATTACACAACGAAAGAAAAAACATGTCCTGATGGTGAAAAGCAAAGATCTTCCTTCGCCTCCTTCATGTGCAGGCATTCCGACTCCCTCCACATTTCACTCTAATAGCATTCCTTCCTACCCTTATTCGAGATCTGATCTCGAGAATGGGAGCTCCTACTTTGGAGCTCAGGTCTTTACCTATGCTGAACTTGAGGAAGCAACTCATAATTTTGACCCTTCGAGGGAGCTTGGAGATGGAGGCTATGGTACTGTTTACTCTGGAACACTCAAGGATGGACGGATAGTTGCAGTAAAGCGCCTATATGAAAACAATTATAAACGTGTCGAGCAGTTCATGAATGAAGTCGAGATTCTATCACGATTGCAACACCCGAACCTTGTGAAGCTTTATGGATGCACCTCGAGACATAGTCGAGAACTTCTCCTAGTATATGAATACATTCCTAATGGAACGGTGGCCGACCATCTGCATGGAAATAGAGCAAATTCTGGTTTGCTCAGTTGGTCTGTTCGGCTGAAGATTGCTATAGAGACTGCTAATGCACTGGCTTACCTCCATCGCAAAGACATCATCCATCGCGATGTCAAAACCAATAACATTCTCCTAGACAACAACTTCAAAGTAAAAGTGGCTGATTTCGGCTTGTCACGGTTATTCCCTGTCGATGTTACTCATGTTTCAACTGCTCCACAGGGGACACCAGGCTACGTTGATCCTGAGTATTATCAGTGCTACCAACTTACTGACAAAAGCGACGTGTATAGCTATGGAGTTGTTTTGGTTGAGCTTATATCATCACTGCAAGCAGTTGACATCAACAGGAACAGAAATGACATCAATTTGTCGAATATGGCCATAGATAGAATTCAAAAACATGCTTTAAGTGATTTAGTAGATCCAGATCTTGGGTTTGACAGGGATTATGCAGTAAGGTCTATGATAACATCAGTGGCAGAGTTGGCATTTCGATGTCTTCAACAGGCACGGGATCTTCGGCCTTCTATGAACGAAGTACTGGAAGTTCTGAAAGAAATAGAGAATGAAGAACTGGCTGCTCGTAAAGCAGAAGTGTTGGATATAGGGTCTGACAATGTACGGCTTTTAAGGAATGCATCATCTCTGCTTTCACCAGATTCCGGACCAGTGACAGATAGATGGATGAAGGTCTTGAACAGAACAAGTTAA 2043 45.42 MDSPNFFFLLFFSFSLLFVIFGNPFDFDLYNSCSNHFNCGDINHVGFPFWGDGRPPGCGHPALKLACQGRNTTIVIKEVKYQILKFDNDSLTLTIARADYMDDLCPNKFINTTIDYNLFDVIPNNRNITLIYCSSSPIAGQFRCPDYEFGFIQATPVVPSLCNVSVIVPVSLDFFPPVSDVVNSTEVWTAIKDGFEVRLKEDDHGCEICEESEGVCGYDWSSNQTTCYCRYGAYRDNGACRSLPAGGGPASAPGGNDSKKTHLLIGLSVGGATVLGLCLGCCVFYITQRKKKHVLMVKSKDLPSPPSCAGIPTPSTFHSNSIPSYPYSRSDLENGSSYFGAQVFTYAELEEATHNFDPSRELGDGGYGTVYSGTLKDGRIVAVKRLYENNYKRVEQFMNEVEILSRLQHPNLVKLYGCTSRHSRELLLVYEYIPNGTVADHLHGNRANSGLLSWSVRLKIAIETANALAYLHRKDIIHRDVKTNNILLDNNFKVKVADFGLSRLFPVDVTHVSTAPQGTPGYVDPEYYQCYQLTDKSDVYSYGVVLVELISSLQAVDINRNRNDINLSNMAIDRIQKHALSDLVDPDLGFDRDYAVRSMITSVAELAFRCLQQARDLRPSMNEVLEVLKEIENEELAARKAEVLDIGSDNVRLLRNASSLLSPDSGPVTDRWMKVLNRTS 680
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 68376493 68386024 + Tan0019637.2 Tan04g1958 750362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan04g1958 680 FunFam WAK1-OsWAK receptor-like cytoplasmic kinase (OsWAK-RLCK) 328 432 - -
Tan04g1958 680 Gene3D Phosphorylase Kinase; domain 1 329 432 - -
Tan04g1958 680 ProSiteProfiles Protein kinase domain profile. 356 636 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan04g1958 680 ProSitePatterns Protein kinases ATP-binding region signature. 362 384 IPR017441 GO:0005524(InterPro)
Tan04g1958 680 Gene3D Transferase(Phosphotransferase) domain 1 433 645 - -
Tan04g1958 680 SMART serkin_6 356 628 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan04g1958 680 SUPERFAMILY Protein kinase-like (PK-like) 337 632 IPR011009 -
Tan04g1958 680 CDD STKc_IRAK 362 631 - -
Tan04g1958 680 ProSitePatterns Serine/Threonine protein kinases active-site signature. 476 488 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan04g1958 680 Pfam Protein kinase domain 359 626 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan04g1958 680 Pfam Wall-associated receptor kinase galacturonan-binding 33 97 IPR025287 GO:0030247(InterPro)
Tan04g1958 680 FunFam Wall-associated receptor kinase-like 20 433 641 - -
Tan04g1958 680 Pfam Wall-associated receptor kinase C-terminal 160 230 IPR032872 -
Tan04g1958 680 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 17 673 IPR044652 GO:0004672(InterPro)|GO:0016301(PANTHER)|GO:0016310(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan04g1951 Tan-Chr4:68128423 Tan04g1958 Tan-Chr4:68376493 1.60E-80 dispersed
Tan04g1955 Tan-Chr4:68271607 Tan04g1958 Tan-Chr4:68376493 2.00E-80 dispersed
Tan04g1956 Tan-Chr4:68361743 Tan04g1958 Tan-Chr4:68376493 6.40E-290 dispersed
Tan04g1958 Tan-Chr4:68376493 Tan11g0102 Tan-Chr11:1099104 2.10E-184 dispersed
Tan04g1957 Tan-Chr4:68361743 Tan04g1958 Tan-Chr4:68376493 7.60E-272 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67481 PF00069 Pkinase 2.00E-50 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan04g1958 - - - 0.0