Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan04g1990 ATGGCGGCTACGGCTGACCGGCCCCGCCCTGTCGTGAAGTTTTCCGCCCAGGGGATTCGGTGTGATGAGGATTCGGCGGAGACTCCGCCTCTGCTTTTCAGGATGTTGAGTTATCCGATTGGGATTATTCACCACCAGTTGCGTCGCCGTCTCGGTGCCGGGAAGCCACAAGCGCCCCGGCGTCAGCAGTCTTTTAGTCGAGATTTTGGCCATGCTGCTGCGGAGACCGTTCTTGTTACTCGGTTGAGCTTCACTCTTCTTCGATCTCTTGGGATAGGGTACCGGTGGGTCGTAAGATTAACTGCACTTGCAGTGTATGCCATTCTTCTTATGCCCGGTTTTCTTCAAGTTATGTATGATTATTTCTTCTCAAGTCAGGTTCGGAGGGATATTATTTATGGAAATCAACCAAGAAATAGCTTGGATTTATATTTACCTACAAATACTGATAAAAAAAAACCAGTTGTGATATTTGTTAGCGGCGGAGCTTGGATTATTGGGTATAAAGCATGGGGAGCTCTTTTAGGAATGCAGTTGGCAGAGAGAGACGTCATTGTGGCCTCAATTGACTACAGAAATTTCCCGCAGGGTACAATTAGTGACATGGTGAAAGATGTTTCTCAAGGGATTTCATTTGTCTGCAAGAATATAGCAGACTATGGAGGAGATCCGGACAGAATCTTTCTAATGGGACAATCAGCTGGTGCACACATTTCCGTTTGTGCCCTCTTGGATCAAGCAATCAAAGAAGCTGGAAAAGGAGAGAGCGTAGATTGGAGTGTCTCCCAAATAAAAGCTTATTTTGGCTTATCTGGAGGTTATAACTTATCGAAACTAGTTGATCACTTCGATAGTCGGGGTCTATATCGTTCTGTCTTTTTGAGCATAATGGAAGGTGAAGAATCTTTGTCCCATTTTTCCCCTGAAATAAGAATCCAAGATCATAGCATTAGAGATGTTATATCCAGCTTACCTCCTTTTGTTCTTTTCCATGGCACTGGTGATTATTCAATCCCATCAGATGCCAGTGAAACTTTTGTGGAGACACTTAGAAAAGCAGGGGCACAAGCTGACCTATTTCTCTATGGGGGAAAAACTCATACAGATTTGTTCCTTCAGGACCCTTTTCGTGGAGGCAGTTACGAACTATTTGATCAAATAGTTTCCATATTACATGCTGACGACGAGGAAGCTCTTGCAAAGGATTCCATGGCGCCACCAAAACCGCGCCTTGTTCCAGAGATTTTGATAAGATTGGCACGAATGGTTAGCCCTTTCTGA 1281 44.73 MAATADRPRPVVKFSAQGIRCDEDSAETPPLLFRMLSYPIGIIHHQLRRRLGAGKPQAPRRQQSFSRDFGHAAAETVLVTRLSFTLLRSLGIGYRWVVRLTALAVYAILLMPGFLQVMYDYFFSSQVRRDIIYGNQPRNSLDLYLPTNTDKKKPVVIFVSGGAWIIGYKAWGALLGMQLAERDVIVASIDYRNFPQGTISDMVKDVSQGISFVCKNIADYGGDPDRIFLMGQSAGAHISVCALLDQAIKEAGKGESVDWSVSQIKAYFGLSGGYNLSKLVDHFDSRGLYRSVFLSIMEGEESLSHFSPEIRIQDHSIRDVISSLPPFVLFHGTGDYSIPSDASETFVETLRKAGAQADLFLYGGKTHTDLFLQDPFRGGSYELFDQIVSILHADDEEALAKDSMAPPKPRLVPEILIRLARMVSPF 426
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 70562333 70576692 - Tan0022865.1 Tan04g1990 750394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan04g1990 426 Gene3D alpha/beta hydrolase 122 374 IPR029058 -
Tan04g1990 426 PANTHER AB HYDROLASE SUPERFAMILY PROTEIN C4A8.06C 59 392 IPR050300 GO:0016298(PANTHER)
Tan04g1990 426 SUPERFAMILY alpha/beta-Hydrolases 104 391 IPR029058 -
Tan04g1990 426 Pfam BD-FAE 141 350 IPR049492 -
Tan04g1990 426 FunFam Isoprenylcysteine alpha-carbonyl methylesterase ICME 123 375 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan04g0916 Tan-Chr4:7948985 Tan04g1990 Tan-Chr4:70562333 2.80E-135 dispersed
Tan04g1990 Tan-Chr4:70562333 Tan11g1985 Tan-Chr11:35036694 1.20E-137 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan04g1990 K15889 - csv:101206540 631.713