Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tan04g2007 | ATGGCGATTGTGATTTTTCTAACAACGCTTTTAGTGATTTTTATTTCAACACTTGCAAAGATTGCATATGATACTGTCTCATGCTACTGGCTGACCCCAAAAAGAATCAGGGAGACGATGGCGAAGCAAGGTGTTTTCGGCCCCAAGCCGCGACCGCTGATCGGAAACATCCTCGACGTAGCGGCACTCGTGGCGAAATCCACCACCGACGACATGAGTTCGATCAACCACGACATCGTCGACCGCCTGTTGCCCCATTACACTGCATGGACAAAACAATACGGAAAGAGGTTTATTTATTGGAACGGGACGGAGCCGAGGTTGTGTTTGACGGAGACGGAAATGATAAAAGAACTATTGGGGAAAAACAGCAGTGTGTGTGGGAAATCATGGCTGCAAAGACAGGGAACCAAACATTTCATAGGGAAAGGATTGTTGATGGCAAATGGGGAAGATTGGTATCATCAACGTCACATCGTTGCACCTGCGTTTATGGGGGAAAAGCTCAAGAGCTATGCGGGTTTCATGGTGGAGTGCACTGAGAAAATGATTCAATCAATGGAGACCGAGTTGGAATCGGGTCGGACCGAGTTCGAAATCGCTGATTACATGAAACGACTCACCGCCGACATCATTTCTCGGACTGAGTTCGACACCAGCGCCGAAAAAGGAAAGCAAATCTTCCATTTGCTCACTCTTCTTCAGCGCCTCTGCGCCCAAGCCAGCCGCCACCTCTGCCTTCCCGGTAGCCGGTTTTTTCCAAGTAAATACAACAGAGAAATAAAGTCACTAAAAATGGAGGTGGAGAGATTGTTAATGGAGATCATAGAAAGCAGAAAAAATGGTGTGGAAATTGGAAGAAGCAGTTGCTATGGAAGTGATTTGTTAGGAATGCTGTTGAACGAGATGCAGAGAAAAAGAGAAGATGGATTCAGCTTGAACTTGCAGCTGATAATGGATGAATGCAAAACTTTTTTCTTTGCTGGCCATGAAACCACTGCTCTTTTGCTCACTTGGACCATCATGTTGCTTGCCAGTAACCCTACTTGGCAACACAAGCTAAACATGGTGATAAACGAATCCCTAAGGCTGTACCCACCGGCGACGGTGCTACCAAGAATAGCATTTGAAGACATAAAGCTAGGAGATTTAGAGATCCCAAAAGGGCTATCGATATGGATTCCAGTGCTAGCAATTCATCATAGCGAAGAGTTGTGGGGAAAAGATGCAAACGAGTTCAACCCAGAAAGATTTGCCTCAAAACCATTTGCAGCTGGACGTTTCATTCCATTTGCAGCTGGACCAAGAAACTGCATTGGCCAAGGCTTTGCAATCATGGAAGCTAAGATCATTTTGGCTATGTTTCTCTCTAAGTTTAGCTTCACTATTTCAGATTCTTATCGCCATGCTCCTGTTGTTGTTCTCACCATTCAGCCTAAGTATGGAGTTCAAGTTTGTTTGACCCCATTGAATTAA | 1476 | 45.19 | MAIVIFLTTLLVIFISTLAKIAYDTVSCYWLTPKRIRETMAKQGVFGPKPRPLIGNILDVAALVAKSTTDDMSSINHDIVDRLLPHYTAWTKQYGKRFIYWNGTEPRLCLTETEMIKELLGKNSSVCGKSWLQRQGTKHFIGKGLLMANGEDWYHQRHIVAPAFMGEKLKSYAGFMVECTEKMIQSMETELESGRTEFEIADYMKRLTADIISRTEFDTSAEKGKQIFHLLTLLQRLCAQASRHLCLPGSRFFPSKYNREIKSLKMEVERLLMEIIESRKNGVEIGRSSCYGSDLLGMLLNEMQRKREDGFSLNLQLIMDECKTFFFAGHETTALLLTWTIMLLASNPTWQHKLNMVINESLRLYPPATVLPRIAFEDIKLGDLEIPKGLSIWIPVLAIHHSEELWGKDANEFNPERFASKPFAAGRFIPFAAGPRNCIGQGFAIMEAKIILAMFLSKFSFTISDSYRHAPVVVLTIQPKYGVQVCLTPLN | 491 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 4 | 71381980 | 71386644 | + | Tan0013310.1 | Tan04g2007 | 750411 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tan04g2007 | 491 | Coils | Coil | 261 | 281 | - | - | |
| Tan04g2007 | 491 | PRINTS | E-class P450 group I signature | 317 | 334 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan04g2007 | 491 | PRINTS | E-class P450 group I signature | 428 | 438 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan04g2007 | 491 | PRINTS | E-class P450 group I signature | 438 | 461 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan04g2007 | 491 | PRINTS | E-class P450 group I signature | 337 | 363 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan04g2007 | 491 | PRINTS | E-class P450 group I signature | 91 | 110 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan04g2007 | 491 | PRINTS | E-class P450 group I signature | 396 | 420 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan04g2007 | 491 | SUPERFAMILY | Cytochrome P450 | 47 | 489 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan04g2007 | 491 | PANTHER | CYTOCHROME P450 FAMILY MEMBER | 7 | 483 | IPR050665 | GO:0004497(PANTHER) | |
| Tan04g2007 | 491 | Pfam | Cytochrome P450 | 87 | 354 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan04g2007 | 491 | Pfam | Cytochrome P450 | 354 | 464 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan04g2007 | 491 | Gene3D | Cytochrome P450 | 29 | 491 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan04g2007 | 491 | PRINTS | P450 superfamily signature | 438 | 449 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan04g2007 | 491 | PRINTS | P450 superfamily signature | 328 | 345 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan04g2007 | 491 | PRINTS | P450 superfamily signature | 356 | 367 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan04g2007 | 491 | PRINTS | P450 superfamily signature | 429 | 438 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Tan04g2007 | Tan-Chr4:71381980 | Tan11g0347 | Tan-Chr11:2802230 | 6.10E-226 | dispersed | |
| Tan04g2007 | Tan-Chr4:71381980 | Tan08g0209 | Tan-Chr8:1911372 | 4.10E-89 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tan04g2007 | K10717 | - | csv:101213604 | 874.389 |