Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan04g2034 ATGGCAACGCTAATGTCGGGCTCCAGAATTCAACCAGCCGCTTCTGTTCTTTCCACCTCCATCAAGCACCTGGGTTTTACTTCCTACCTTCGTTCCAATTGCCTTGTCTCTCCTCCTCACCATTCCTCCTTCTGCTTGAGGCGCTCTGCACCTAAACGAGCTCTCTCTATTTCCATGTCGCTTACCCCTCTTGAAGCCTGTGTCAAGGCTTCCATTACCGTCCCCAACAGGCTCGGCGACTGCCCTTTTTGCCAAAGGGTATTGCTGACTTTGGAGGAAAAGCATCTACCCTATGACCTAAAGTTGGTAGACCTGTCAAACAAGCCAGATTGGTTCTTAAAAATAAATTCAGAGGGAAAAGTTCCTGTTATTAAATTTGATGAGCAGTGGGTTGCAGATTCAGATGTTATAACACAAACATTGGAAGAGAAGTACCCAAATCCACCTTTAGCGACCCCTCCTGATAAATCTTCAGTAGGATCAAAGATTTTCTCCACATTTATTGCTTTCCTAAAGAGCAAGGATCCTAATGATGAAACCGAACAAGCATTACTTAGCGAGCTAAGTTCTTTCAACGATCACATCAAAGAGAATGGCCCTTTTATCAATGGGAAAGAGATTTCTGCTGCAGACCTGTCACTTGGTCCAAAGTTGTACCATTTAGAAATTGCATTGGGCCACTATAAGAACTGGTCTGTTCCAGACAGCCTACCCTACGTTAAGTCTTACATGAAGAGCATATTCTCAAGAGAGTCGTTTGCAAAAACTCGTGCACTGCCTGAGGATGTTATTGCTGGTTGGCGTCCAAAGGTCTTGGGATGA 822 44.65 MATLMSGSRIQPAASVLSTSIKHLGFTSYLRSNCLVSPPHHSSFCLRRSAPKRALSISMSLTPLEACVKASITVPNRLGDCPFCQRVLLTLEEKHLPYDLKLVDLSNKPDWFLKINSEGKVPVIKFDEQWVADSDVITQTLEEKYPNPPLATPPDKSSVGSKIFSTFIAFLKSKDPNDETEQALLSELSSFNDHIKENGPFINGKEISAADLSLGPKLYHLEIALGHYKNWSVPDSLPYVKSYMKSIFSRESFAKTRALPEDVIAGWRPKVLG 273
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 73261316 73266524 + Tan0008990.1 Tan04g2034 750438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan04g2034 273 Pfam Glutathione S-transferase, N-terminal domain 81 143 IPR004045 -
Tan04g2034 273 SUPERFAMILY GST C-terminal domain-like 144 270 IPR036282 -
Tan04g2034 273 SUPERFAMILY Thioredoxin-like 79 148 IPR036249 -
Tan04g2034 273 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 71 149 IPR004045 -
Tan04g2034 273 SFLD Main (cytGST) 80 247 - -
Tan04g2034 273 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 127 273 IPR010987 -
Tan04g2034 273 CDD GST_N_family 81 142 - -
Tan04g2034 273 CDD GST_C_DHAR 150 270 - -
Tan04g2034 273 Gene3D Glutaredoxin 62 150 - -
Tan04g2034 273 FunFam Glutathione S-transferase DHAR3, chloroplastic 151 273 - -
Tan04g2034 273 Gene3D - 151 272 - -
Tan04g2034 273 FunFam Glutathione S-transferase DHAR3 chloroplastic 62 150 - -
Tan04g2034 273 PANTHER GLUTATHIONE S-TRANSFERASE DHAR2-RELATED 64 270 IPR044627 GO:0010731(PANTHER)|GO:0033355(InterPro)|GO:0045174(PANTHER)|GO:0045174(InterPro)|GO:0098869(InterPro)
Tan04g2034 273 SFLD Glutathione Transferase (cytosolic) 80 247 IPR040079 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan04g0339 Tan-Chr4:2756110 Tan04g2034 Tan-Chr4:73261316 1.30E-71 dispersed
Tan04g0340 Tan-Chr4:2762953 Tan04g2034 Tan-Chr4:73261316 7.70E-75 dispersed
Tan04g2034 Tan-Chr4:73261316 Tan04g2035 Tan-Chr4:73261316 2.90E-140 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan04g2034 K21888 - csv:101203335 495.352