Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan04g2049 ATGGAGGTCTCCAATTGGTTCCAGCGGGGATTTTTGACGGTGGTGGTTCTGGGCTTAGCTTTTCTGGGTTCTGTCCGGCCGGATCTGGCCTCCGACAGGGCGGCGCTGGTGGGTTTCCGCGCGGCGATGGGTGGTCGCCCCCGATTGGAGTGGAATCTCTCTGATGCATCTCCCTGTTCTTGGGCGGGTGTTAACTGTGACAGAAATGGGGTTTTTGAACTTCGACTTCCGGCAATGGGACTTTCCGGGGAGCTTCCGGTGGGGCTTGGAAATTTGACGCAGTTACAAACTCTGTCTCTGCGGTTTAATGCTTTGTCCGGCCGGATTCCGGCGGATTTTGAGAATCTTCGTGCGTTGAGGAATCTTTACTTGCAGGGGAACATGTTTTCTGGCGAAATTCCAGCGTTTTTGTTCGATTTGAAGAACTTGGTCCGGTTAAACATGGCAGACAACAAATTTTCAGGTGAGGTTCCATCTGGGTTTAACAATTTGTCCCGTTTGGCTACTCTGTATTTACAGAACAATCAGTTTAGTGGAGCGGTTCCTGATTTGAATCTCCCTCTTGCCCAATTTAATATATCGTTTAATGGATTGAATGGTTCGATTCCGTCGAAGCTCTCTGGTTTTCCGGCGGATGCTTTTGAGGGGAATTCGCTCTGTGGAGCACCATTGTTGCTCTGTAACTCGACAGCCCCTGAGCCCCGTCGAAAGTCGAAGCTCTCCGGCGGGGCAATTGCTGGAATTGTGATAGGTGGTTTGTTTATATTGGTGTTGATTCTGGTTGTTTTGATTCTGGTGTGCCAAAGGAAGAGTAAGGGGAAATTGAAAGACAGGGTTCAGTCGGGCGGCCGGGAGGTTGAGATGTCAGGGGAGAAGACGACGGTGGCGACGGAGAGTTGCGAAATTATAAGTGTAGATCATTTGACTGCACCGAGATCCACGACGGGGAAGGGCGGCGAGAGGGATAAGAGATTGGTGTTCTTTGGGAATGTGGGGAATGTGTTTGATTTGGAGGATTTGTTGAGGGCGTCGGCGGAGGTTCTCGGGAAGGGGACGTTCGGGACGGCGTATAAGGCAACATTGGAGACGGGAATGGTGGTCGCCGTGAAGAGGCTGAAGGAGATGACCGCGGCGGAGAAGGAGTTCAGGGAGAAGATGGAGGAGGTGGGGAGGATGAAGCATGAGAATTTGGTGCCTCTAAGAGCTTATTATTACAGCAGAGAGGAAAAGCTTTTGGTTTATGATTACATGCCAATGGGAAGCTTGTCTGCACTTTTACATGGTAGTAGAGAGTCCGGAAGAAGTCCATTGAATTGGGAAGCAAGGTCGAGCATTGCGCTCGGCGTCGCTCGTGGGATTCATTACCTTCATTCTCAAGGCCCCGCCATCTCTCACGGCAACATCAAGTCCTCAAACGTTCTCCTCACCCGATCATACGAAGCCTGTGTATCCGACTTCGGCCTCGCACAACTAGCAATGCCCCCCACAGCTCCAAGTCGTGTCGCTGGGTACCGAGCCCCAGAGGTCACCGATACTCGAAAGGTATCGCAAAAGGCAGACGTCTATAGTTTCGGAGTGTTATTATTGGAAGTGCTAACAGGAAAAGCTCCTACACATTCTATCTTGAATGAGGAAGGTGTAGACCTTCCTAGATGGGTTCAATCTGTAGTTCAAGAGGAATGGACTGCTGAAGTGTTTGATGAAGAACTTCTTAGATACCAAAATGTTGAGGAGGAGATGGTTCAACTCTTGGAACTAGGTTTGCAATGTACAATCTCGTATCCCGACAACCGTCCGGGAACAGAGGAGGTTGTCCGACGAATCGAAGAACTCTGTCGATCGACCTCACAAAAACGCAGTGAGACAATGGACAACGATGGAAACAATGATATTTCCACACAGTTTCATTCAGTAAGCTCAGGTGATCAACCATCTGCACGGTAG 1944 50.0 MEVSNWFQRGFLTVVVLGLAFLGSVRPDLASDRAALVGFRAAMGGRPRLEWNLSDASPCSWAGVNCDRNGVFELRLPAMGLSGELPVGLGNLTQLQTLSLRFNALSGRIPADFENLRALRNLYLQGNMFSGEIPAFLFDLKNLVRLNMADNKFSGEVPSGFNNLSRLATLYLQNNQFSGAVPDLNLPLAQFNISFNGLNGSIPSKLSGFPADAFEGNSLCGAPLLLCNSTAPEPRRKSKLSGGAIAGIVIGGLFILVLILVVLILVCQRKSKGKLKDRVQSGGREVEMSGEKTTVATESCEIISVDHLTAPRSTTGKGGERDKRLVFFGNVGNVFDLEDLLRASAEVLGKGTFGTAYKATLETGMVVAVKRLKEMTAAEKEFREKMEEVGRMKHENLVPLRAYYYSREEKLLVYDYMPMGSLSALLHGSRESGRSPLNWEARSSIALGVARGIHYLHSQGPAISHGNIKSSNVLLTRSYEACVSDFGLAQLAMPPTAPSRVAGYRAPEVTDTRKVSQKADVYSFGVLLLEVLTGKAPTHSILNEEGVDLPRWVQSVVQEEWTAEVFDEELLRYQNVEEEMVQLLELGLQCTISYPDNRPGTEEVVRRIEELCRSTSQKRSETMDNDGNNDISTQFHSVSSGDQPSAR 647
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 73851742 73854018 - Tan0007181.1 Tan04g2049 750453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan04g2049 647 PANTHER OS05G0588300 PROTEIN 10 617 IPR050994 -
Tan04g2049 647 Gene3D Ribonuclease Inhibitor 29 223 IPR032675 -
Tan04g2049 647 MobiDBLite consensus disorder prediction 626 647 - -
Tan04g2049 647 ProSiteProfiles Protein kinase domain profile. 342 611 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan04g2049 647 Gene3D Transferase(Phosphotransferase) domain 1 417 637 - -
Tan04g2049 647 Pfam Leucine Rich Repeat 142 164 IPR001611 GO:0005515(InterPro)
Tan04g2049 647 Pfam Leucine Rich Repeat 94 116 IPR001611 GO:0005515(InterPro)
Tan04g2049 647 Pfam Leucine Rich Repeat 119 139 IPR001611 GO:0005515(InterPro)
Tan04g2049 647 Pfam Leucine rich repeat N-terminal domain 30 67 IPR013210 -
Tan04g2049 647 MobiDBLite consensus disorder prediction 615 647 - -
Tan04g2049 647 SUPERFAMILY Protein kinase-like (PK-like) 346 608 IPR011009 -
Tan04g2049 647 FunFam pollen receptor-like kinase 1 312 416 - -
Tan04g2049 647 Coils Coil 375 395 - -
Tan04g2049 647 CDD STKc_IRAK 348 611 - -
Tan04g2049 647 Gene3D Phosphorylase Kinase; domain 1 319 416 - -
Tan04g2049 647 Pfam Protein kinase domain 346 606 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan04g2049 647 SUPERFAMILY L domain-like 50 209 - -
Tan04g2049 647 FunFam Probable inactive receptor kinase At1g48480 417 619 - -
Tan04g2049 647 ProSitePatterns Protein kinases ATP-binding region signature. 348 370 IPR017441 GO:0005524(InterPro)
Tan04g2049 647 FunFam Probable inactive receptor kinase RLK902 29 185 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan04g2049 Tan-Chr4:73851742 Tan05g2172 Tan-Chr5:72517349 6.70E-172 dispersed
Tan09g0936 Tan-Chr9:61392219 Tan04g2049 Tan-Chr4:73851742 8.70E-41 dispersed
Tan04g2049 Tan-Chr4:73851742 Tan08g0198 Tan-Chr8:1771376 8.90E-124 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67483 PF00069 Pkinase 2.90E-38 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan04g2049 - - - 0.0