Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan04g2073 | ATGTGGACCTTATCAAATTGCAGTAAGCCAGTGGAACTCGATCGTCTTTTTGATTGCCTTCCCAACTCTTTGCGTCCATCATCAGCATCTGCGCACCACGGTGATAATGGTAGCAAAAATAATTCTGACCATCACAACAAAAGCTTAAAAGTTGCCATCTTCATTCCCCCAACTCTTATTCCTCTCAGGGTCAAACTGCTGTTTGCTGGGGAAAAGAAAATCTGTGATCAAATATTTGATGGTGTAGACTCTATCCAGGATCAATGCTTTGCAGATGTGACTGCAAACAGTGTGTCAATGCTACTAAGTTTTGGAGAGGCAATTGCAAGAAGCAAGAGATCTCTAGAAAAATTGTTTGTTCTATTAGACATGTTTGAAATAATGCGAGAACTGCAATCTGAGGTTGAAACACTTTTTGGAACTAAAGCACGCATTGAAATGCGGGATTCTGCATTGAGCTTAACACAACGCCTTGCTGAGGCAGCTCAAGAGACCTTTGTTGATTTTGAAGAAGTCGTGGAAAAAGATGCCACAAAAACTGTTGTTCTTGATGGGACTGTTCATCCCTTGACTAGTTATGTGATAAACTACGTCAAGTTCTTATTTGACTACCAATCTACTTTGAAGCAACTATTCCAAGACTTTGACGCTGGTGATCCAGATGCTCAATTAGCAGTGGTAACTACAAGAATTACGCAAGCCCTTCAGACTAATCTTGATAGAAAATCTAAGCAATATAGGGATCCTGCATTAACTCAATTGTTTCTGATGAACAATATTCACTATATAGTGAGATCTGTCCGAAGATCGGAGGCAAAGGATTTGCTGGGTGATGACTGGGTGCAGATACATCGAAGGATTGTGCAGCAGCATGCAAATCAATACAAGCGGATTTCTTGGGCAAAGGTCAAGAAGGAACCTTAG | 924 | 40.8 | MWTLSNCSKPVELDRLFDCLPNSLRPSSASAHHGDNGSKNNSDHHNKSLKVAIFIPPTLIPLRVKLLFAGEKKICDQIFDGVDSIQDQCFADVTANSVSMLLSFGEAIARSKRSLEKLFVLLDMFEIMRELQSEVETLFGTKARIEMRDSALSLTQRLAEAAQETFVDFEEVVEKDATKTVVLDGTVHPLTSYVINYVKFLFDYQSTLKQLFQDFDAGDPDAQLAVVTTRITQALQTNLDRKSKQYRDPALTQLFLMNNIHYIVRSVRRSEAKDLLGDDWVQIHRRIVQQHANQYKRISWAKVKKEP | 307 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 74949020 | 74959145 | - | Tan0009388.1 | Tan04g2073 | 750477 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan04g2073 | 307 | PANTHER | EXOCYST COMPLEX PROTEIN EXO70 | 64 | 303 | IPR004140 | GO:0000145(PANTHER)|GO:0000145(InterPro)|GO:0006887(PANTHER)|GO:0006887(InterPro) | |
Tan04g2073 | 307 | Pfam | Exo70 exocyst complex subunit C-terminal | 64 | 303 | IPR046364 | GO:0000145(InterPro)|GO:0005546(InterPro)|GO:0006887(InterPro) | |
Tan04g2073 | 307 | Gene3D | Exocyst complex component Exo70 | 2 | 306 | - | - | |
Tan04g2073 | 307 | SUPERFAMILY | Cullin repeat-like | 67 | 303 | IPR016159 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan04g0719 | Tan-Chr4:6197485 | Tan04g2073 | Tan-Chr4:74949020 | 1.70E-106 | dispersed | |
Tan04g2073 | Tan-Chr4:74949020 | Tan05g2361 | Tan-Chr5:74963276 | 2.10E-43 | dispersed | |
Tan04g2073 | Tan-Chr4:74949020 | Tan05g2961 | Tan-Chr5:81690153 | 1.60E-43 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan04g2073 | K07195 | - | csv:105436018 | 437.958 |