Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan04g2081 | ATGATTTGGATGCTGTGTGAGCAACACTCAAGTTATGCTCTTGTGAGAAAACAAGTGGTTTTTCCAATACATTCATATAAGTTGAAGACTCGAGTAGTTGAGCAAAGCACAAATCCAGAGTGGAATCATGATCTAACTTTCGTGATCGAAGATCCAGATCTCCCAGTCAAACTGTTTGTATACGACAAGGACTTGTTCTCATTAGACGACAGAATGGGCGACGCAGAGTTCGACGTTCGCCCATTCATTGAAGTTGTGAAGATGAGACTAAAGAACCTTCCCAATGGAACCATCATAAGAAAGATTCAACCAAGTAGGGAGAATTGCTTGTCTGAAGAAAGTTACATTTTTTGGGCAGATGGACAAGTTATTCAGAAAATGTTTCTAAGGCTAAGAAATGTGGAGTGTGGTGAAGTTGAACTGCAGTTGAAATGGGTTGATATTCCTGGTTCTAGGGGATTGTAG | 465 | 40.43 | MIWMLCEQHSSYALVRKQVVFPIHSYKLKTRVVEQSTNPEWNHDLTFVIEDPDLPVKLFVYDKDLFSLDDRMGDAEFDVRPFIEVVKMRLKNLPNGTIIRKIQPSRENCLSEESYIFWADGQVIQKMFLRLRNVECGEVELQLKWVDIPGSRGL | 154 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 75044453 | 75047187 | + | Tan0021311.2 | Tan04g2081 | 750485 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan04g2081 | 154 | PANTHER | PROTEIN C2-DOMAIN ABA-RELATED 4 | 19 | 152 | IPR044562 | - | |
Tan04g2081 | 154 | Pfam | C2 domain | 22 | 81 | IPR000008 | - | |
Tan04g2081 | 154 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 19 | 102 | IPR035892 | - | |
Tan04g2081 | 154 | Gene3D | C2 domain | 10 | 149 | IPR035892 | - | |
Tan04g2081 | 154 | ProSiteProfiles | C2 domain profile. | 1 | 95 | IPR000008 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan04g2081 | Tan-Chr4:75044453 | Tan05g2189 | Tan-Chr5:72792891 | 1.20E-47 | dispersed | |
Tan04g2080 | Tan-Chr4:75044453 | Tan04g2081 | Tan-Chr4:75044453 | 1.20E-72 | tandem | |
Tan04g2081 | Tan-Chr4:75044453 | Tan04g2082 | Tan-Chr4:75077650 | 1.40E-59 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan04g2081 | - | - | - | 0.0 |