Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan04g2183 ATGTCGTCCAACATCGCCATTGGAGAAGAAGAAGAAAAAGTTTCTGATCCTCAATCTCAACGGACAAATCTCCGACGATACGACTCCTTAGATTTAGAGTCTCGTAAACTTGACGGTCATCATCCTCATCATTCTGACGATGCTAAGAACCAGAAATGGAGTGTGGTATTACAACTAGCATTTCAGAGCATCGGCATAGTGTACGGGGACATCGGAACGTCGCCATTGTACGTGTACTCAAGCACATTTTTGGACGGAATAAAACACAACGACGACATTTTAGGTGTTTTGAGTTTGATAATCTACACAATTACTCTGATTCCGGTGATCAAATACGTGTTCATCGTCCTCAAAGCAAACGACAACGGAGAAGGTGGAACATTCGCATTGTACTCTCTGATTTGTCGATATGCGAAAGTAGGGCTAATTCCGAACGAACAGATTGAAGATCGAGATGTGTCAAATTACCAATTGAATTTGCCGAATGAGAGAGAGATGAGAGCCTCGAAGATTCAATCGACGCTGGAGAAAAGCCATTTTGCGAAGCTCTTTCTTCTCTTTGCCACTATGCTTGGAACTTCCATGGTTATCGGTGATGGCGTTCTCACTCCTTGTATTTCAGTTTTATCAGCGGTGGGAGGGATCAAGGAGGCTACCCCGGCAATGACAGAAGGTAGGATTGTTTGGGCATCAGTAGGAATATTGGTGTTCCTGTTCATGTTTCAAAGATTTGGAACAGACAAAGTTGGCTATACTTTTGCTCCAATAATCTTCATTTGGTTTGGTTTCAACGCTGGAATCGGTGTCTACAACTTCATAAAATACGACCCAGCTGTTATAAAGGCCTTAAATCCAAGCTACATTGTCCAATATTTCCAAAGGAACAAAAAGGATGCTTGGATTTCTCTCGGTGGCGTCGTTCTTTCCATTACAGGAACCGAAGCCTTGTTCGCAGACGTCGGGCATTTTAGTGTACGATCAATCCAACTAAGTATGTCAATAGTGGCATACCCAGCTCTAATTTGTGCATATATTGGGCAAGCCTCGTTTCTTCGGAAGCATAATGATCTAGTTTCAAACACATTCTACAAGTCAATTCCTGGAGGATTGTATTGGCCAATGTTCGTGGTGGCAGTTTCAGCATCAATCATAGCAAGCCAAGCAATGATCTCAGGAACATTCTCTATAATTCAACAATCACTTTCACTTGGATGCTTCCCTAGAGTTAAAGTGGTTCATACATCTGATAAGTATGAAGGTCAAGTTTATATTCCTGAGATCAATTACCTTCTCATGTTGGCTTGTGTTGGTGTCACTTTGGGCTTCAAGAACACTACACAGATTGGGAATGCATATGGTATAGCAGTGGTTTTTGTGATGACACTGACATCCTCGTTTCTAGTTCTTATAATGGTGATGATTTGGAAAACTCACATCCTGTTGATAATCACTTACATCCTCATCATTGGTAGTGTGGAATTGTCGTATTTGAGTTCAGTCCTTTACAAGTTTGACCAAGGAGGCTATCTCCCTCTAGCTTTTGCTGGTTGTTTGATGACAGTAATGTATGTGTGGAATAGTGTGTTTAGAAAGAAGTACTTTTATGAGCTCAACCACAAAGTCTCTTTAGAAAAGCTCAATAACATGGTGAATACCAGCAGCTTTAGACGAATTCCTGGCGTCGCATTGTTCTACTCCGAGCTTGTTCAAGGAATCCCTCCCATCTTCAAGCATTACGTCGACTGTGTTCCTGCGTTGCACTCGGTCCTCGTCTTCGTCACCATTAAATCACTTCCCGTCAGCAAGGTTTCAGTCGATGAACGTTTCCTCTTCCGGGAAGTAGAGGCCAAGAAGATCCACGTGTTTCGTTGTGTTGTTCGATATGGATACACCGACATGCACACTGAACAAGAATCTTTTGAGAAGATATTACTCGAAAGATTGGAGGAGTTTGAAAAAGAGAAACAAAATAAGTTGTCAAAAATCGACGAGAGAATTGAAGATGAAGATGAAGATGAGAAAGGATTGGGAGGAGTTGCAAAAGTAAGAAAGGATGGAGTTATTCATTTGGTTGGGGAAACTGAAGTGGTTGCTAAAAAAGGAGCTGGCTTTGGAAACAAAATTGTCATCAACTATGCATATCACTTCTTGAAGAGGAATTTGAGGCAAACCGATCATGTGTTTGATATTCCTCATAAGCATATGCTCAAAGTAGGAATGATATATGATCTTTAG 2235 41.34 MSSNIAIGEEEEKVSDPQSQRTNLRRYDSLDLESRKLDGHHPHHSDDAKNQKWSVVLQLAFQSIGIVYGDIGTSPLYVYSSTFLDGIKHNDDILGVLSLIIYTITLIPVIKYVFIVLKANDNGEGGTFALYSLICRYAKVGLIPNEQIEDRDVSNYQLNLPNEREMRASKIQSTLEKSHFAKLFLLFATMLGTSMVIGDGVLTPCISVLSAVGGIKEATPAMTEGRIVWASVGILVFLFMFQRFGTDKVGYTFAPIIFIWFGFNAGIGVYNFIKYDPAVIKALNPSYIVQYFQRNKKDAWISLGGVVLSITGTEALFADVGHFSVRSIQLSMSIVAYPALICAYIGQASFLRKHNDLVSNTFYKSIPGGLYWPMFVVAVSASIIASQAMISGTFSIIQQSLSLGCFPRVKVVHTSDKYEGQVYIPEINYLLMLACVGVTLGFKNTTQIGNAYGIAVVFVMTLTSSFLVLIMVMIWKTHILLIITYILIIGSVELSYLSSVLYKFDQGGYLPLAFAGCLMTVMYVWNSVFRKKYFYELNHKVSLEKLNNMVNTSSFRRIPGVALFYSELVQGIPPIFKHYVDCVPALHSVLVFVTIKSLPVSKVSVDERFLFREVEAKKIHVFRCVVRYGYTDMHTEQESFEKILLERLEEFEKEKQNKLSKIDERIEDEDEDEKGLGGVAKVRKDGVIHLVGETEVVAKKGAGFGNKIVINYAYHFLKRNLRQTDHVFDIPHKHMLKVGMIYDL 744
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 78209197 78213432 - Tan0006871.1 Tan04g2183 750587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan04g2183 744 Coils Coil 641 672 - -
Tan04g2183 744 MobiDBLite consensus disorder prediction 1 26 - -
Tan04g2183 744 NCBIfam potassium uptake protein 59 743 IPR003855 GO:0015079(InterPro)|GO:0016020(InterPro)|GO:0071805(InterPro)
Tan04g2183 744 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 44 743 IPR003855 GO:0006813(PANTHER)|GO:0015079(InterPro)|GO:0015079(PANTHER)|GO:0016020(PANTHER)|GO:0016020(InterPro)|GO:0071805(InterPro)
Tan04g2183 744 Pfam K+ potassium transporter C-terminal domain 559 743 IPR053952 -
Tan04g2183 744 Pfam K+ potassium transporter integral membrane domain 59 546 IPR053951 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan04g2183 Tan-Chr4:78209197 Tan04g2203 Tan-Chr4:79101987 0.00E+00 dispersed
Tan04g2183 Tan-Chr4:78209197 Tan04g2184 Tan-Chr4:78310197 0.00E+00 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan04g2183 K03549 - csv:101215797 1187.17