Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan04g2184 ATGGCGAATCGGATCTCCGGTGTTTCAGAAGTGTCTTCAGCCGCCAATCCCGACACGTTCTCCGACGTCGCCGTTGAAGAAGAAGAAGAGCTTCCGCCCTCTCTCTCAGATTCTCAGCCTCAAGAGAGAAAACTCTCATGGCAAAAACTCCGACGATACGATTCCTTGGATTTAGAGTCTCGTAAACTTGACGGTCATCATCCTCATCATTCTGATGCTAAGAACCAGAAATGGAGTGTGATATTACAACTAGCATTTCAGAGCATCGGCATAGTGTATGGGGACATCGGAACGTCACCGTTGTATGTGTACTCAAGCACATTTCCAGATGGAATAAAGCACAACGACGACATTTTAGGAGCGCTGAGTTTGATTATTTACACAATCACTCTGATTCCGGTGATCAAATACGTTTTCATTGTCCTCAGAGCCAACGACAACGGAGAAGGCGGAACGTTCGCATTGTACTCTCTGATTTGTCGATATGCGAAAGTAGGGCTAATTCCAAACGAACAGATTGAAGATCGAGATGTGTCGAATTACCAATTGAATTTGCCGAATGAGAGAGAGATGAGAGCTTCGAAGATTCAATCGACGCTGGAGAAAAGCCATTTTGCGAAGCTCTTTCTTCTCTTTGCCACCATGCTTGGAACTTCCATGGTTATCGGTGATGGCGTTCTCACTCCTTGCATTTCAGTTTTATCAGCAGTGGGAGGGATCAAGGAGGCTACCCCAACAATGACAGAAGGTAGGATTGTTTGGGTATCAGTAGGCATATTGGTGTGCCTGTTTATGGTTCAAAGATTTGGAACAGACAAAGTTGGCTATACTTTTGCTCCAATAATCTTCATTTGGTTTGGTTTCAACGCTGGAATCGGTGTCTATAACTTCATAAAATACGACCCAGCTGTTATAAAAGCCTTAAATCCAAAGTACATTGTTGATTATTTCAAAAGGAATAACAAGGATGCTTGGATTTCTCTCGGTGGCGTTGTTCTTGCCATTACAGGGACTGAAGCCTTGTTTGCAGATGTCGGGCATTTCAGCGTCCGATCGATCCAGTTAAGCATGTCAGCAGTAACCTATCCAGCTCTAATTTGTGCATATGTAGGGCAAGCCTCGTTTCTTCGAAAGCATAATGATCTAGTTTCAGACACATTCTACAAGTCAATTCCCGGAGGTTTGTATTGGCCAATGTTTGTGGTGGCAGTTTCAGCATCAATCATAGCAAGCCAAGCAATGATATCAGGAACTTTCTCTATAATTCAACAGTCACTTTCACTTGGATGCTTCCCTAGAGTTAAAGTGGTTCATACATCTGCTAAGTATGAAGGCCAAGTTTATGTTCCTGAGATCAATTACCTTCTCATGTTGGCTTGTGTTGGTGTCACTTTGGGCTTCAAAAATACTACAAAGATTGGCAATGCATATGGAATAGCAGTAGTTTTTGTGATGACACTCACATCCTCCTTCCTAGTTCTTATAATGGTGATGATTTGGAAAACTCACATCCTTTTCATAATCACTTACATTCTCATCATTGGTAGTGTAGAATTTCTCTATCTGAGTTCAGTCCTTTACAAGTTTGATCAAGGAGGCTATCTCCCTCTGGCTTTTGCTGCTGCTTTGATGACAATAATGTATGTATGGAATAGCGTCTTTAGAAAGAAGTACTTTTATGAGCTCAACCACAAAATCTCATCAGAAAAGCTCAATGAGATGGTGAATGGCACCAACTTTAGAAGAATTCCTGGTGTGGCATTGTTCTACTCTGAGCTTGTTCAAGGCATCCCTCCCATCTTCAAGCATTACATCGAGCACGTGCCTGCATTGCACTCCGTGCTCGTCTTTGTCACCATTAAATCACTTCCTGTAAGCAAGGTTCCGGCTGATGAACGTTTCCTCTTTCGGCAAGTAGAGGCCAAGGAGATCGATGTGTTTCGTTGTGTTGTTCGATACGGGTACACCGACGTGCGCACTGAACAAGAATCGTTTGAGAAGATATTACTCGAAAGATTAGAAGAGTTCAAAAGAGTGCACCATAATAAATTGTCAAACGGTGAAACCGGAGTCGACGGGCGAGTTGAAGATGAGGATGAGAAAGGATTTGGAGGAGTTGCAGAAGCATGGAAGGATGGAGTTGTTCATTTGGTTGGAGAAACTGAGATAGTTGCTCAAAAAGGGGCTGGATTTGGAAAGAGAATCATGATAAACTATGCATATAACTTTTTGAAGAGGAATTTGAGACAAACTAATCAAGTGTTTGAAATTCCTCACAAACATATGCTGAAAGTAGGAATGACCTATGAACTTTAG 2316 42.31 MANRISGVSEVSSAANPDTFSDVAVEEEEELPPSLSDSQPQERKLSWQKLRRYDSLDLESRKLDGHHPHHSDAKNQKWSVILQLAFQSIGIVYGDIGTSPLYVYSSTFPDGIKHNDDILGALSLIIYTITLIPVIKYVFIVLRANDNGEGGTFALYSLICRYAKVGLIPNEQIEDRDVSNYQLNLPNEREMRASKIQSTLEKSHFAKLFLLFATMLGTSMVIGDGVLTPCISVLSAVGGIKEATPTMTEGRIVWVSVGILVCLFMVQRFGTDKVGYTFAPIIFIWFGFNAGIGVYNFIKYDPAVIKALNPKYIVDYFKRNNKDAWISLGGVVLAITGTEALFADVGHFSVRSIQLSMSAVTYPALICAYVGQASFLRKHNDLVSDTFYKSIPGGLYWPMFVVAVSASIIASQAMISGTFSIIQQSLSLGCFPRVKVVHTSAKYEGQVYVPEINYLLMLACVGVTLGFKNTTKIGNAYGIAVVFVMTLTSSFLVLIMVMIWKTHILFIITYILIIGSVEFLYLSSVLYKFDQGGYLPLAFAAALMTIMYVWNSVFRKKYFYELNHKISSEKLNEMVNGTNFRRIPGVALFYSELVQGIPPIFKHYIEHVPALHSVLVFVTIKSLPVSKVPADERFLFRQVEAKEIDVFRCVVRYGYTDVRTEQESFEKILLERLEEFKRVHHNKLSNGETGVDGRVEDEDEKGFGGVAEAWKDGVVHLVGETEIVAQKGAGFGKRIMINYAYNFLKRNLRQTNQVFEIPHKHMLKVGMTYEL 771
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 78310197 78319123 + Tan0012044.1 Tan04g2184 750588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan04g2184 771 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 69 770 IPR003855 GO:0006813(PANTHER)|GO:0015079(InterPro)|GO:0015079(PANTHER)|GO:0016020(PANTHER)|GO:0016020(InterPro)|GO:0071805(InterPro)
Tan04g2184 771 Pfam K+ potassium transporter integral membrane domain 84 571 IPR053951 -
Tan04g2184 771 MobiDBLite consensus disorder prediction 1 43 - -
Tan04g2184 771 MobiDBLite consensus disorder prediction 1 19 - -
Tan04g2184 771 Pfam K+ potassium transporter C-terminal domain 584 771 IPR053952 -
Tan04g2184 771 NCBIfam potassium uptake protein 84 770 IPR003855 GO:0015079(InterPro)|GO:0016020(InterPro)|GO:0071805(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan04g2184 Tan-Chr4:78310197 Tan04g2201 Tan-Chr4:78878642 0.00E+00 dispersed
Tan04g2183 Tan-Chr4:78209197 Tan04g2184 Tan-Chr4:78310197 0.00E+00 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan04g2184 K03549 - csv:101215797 1252.27