Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan04g2201 ATGACGTGTTTTAATAAATGGCAAAGAGGGGAGGTTTGTGAAGAGCGTGTGTGTAATTTCCATACAAATAAAAAGGTTGCCGATTCTTCTTCTTCTTCTTCACAACTTCCAAACCAATTGTATTTGGTTTACTTCATTTCATTTCATTTGTCTCTCTACTTTTCTTCATCAATGGCTAATCGGATCTCCGGTGTTTCAGAAGTGTCTTCAGCCGCCAATCCCGACACGTTCTCTGTCGTCGCCGTTGAAGAAGAAGAACTTCCGCCCTCTCTCTCCGATTCTCAGCCTCAAGAGAGAAAACTCTCATGGAAAAAACTCCGACGATACGATTCCTTGGATTTAGAGTCTCGTAAATTTGAAGGCCATCACCCTCATCATTCTGATGCTAAGAAATGGAGTGTGATATTACAACTAGCATTTCAGAGCATCGGCATAGTGTATGGGGACATCGGAACGTCGCCATTATATGTGTACTCAAGCACATTTCCAGATGGAATAAAGCACAACGACGACGTTTTAGGAGTACTGAGTTTGATAATCTACACAATCACTATGATTCCGGTGATCAAATACGTGTTCATCGTCCTCAGAGCCAACGACAACGGAGAAGGCGGAACATTCGCATTGTACTCTCTGATTTGTCGATATGCGAAAGTAGGGCTAATTCCAAACGAACAGATTGAAGATCGAAATGTGTCGAATTACCAGTTGAATTTGCCGAATGAGAGAGAAAAGAGAGCTTCAAAGATTCAATCGACGTTGGAGAAAAGCCATTTTGCGAAGCTCTTTCTTCTCTTTGCCACTATGCTTGGAACTTCCATGGTTATCGGCGATGGCGTTCTCACTCCTTGCATTTCAGTTTTATCAGCGGTGGGAGGGATCAAGGACGCTACCCCAACAATGACAGAAGGTAGGATTGTTTGGGTATCAGTAGGCATATTGGTGTGTCTCTTCATGGTTCAAAGATTTGGAACAGATAAAGTTGGTTACACTTTTGCTCCAATCATCTTCATTTGGTTTGGTTTCAACGCTGGAATCGGTGTTTATAACTTCATAAAATACGACCCAGCTGTTGTAAAGGCCTTAAATCCAAAGTACATTGTTGCTTATTTCAAAAGGAATAACGAGGATGCTTGGATTTCTCTCGGTGGCGTTGTTCTTGCCATTACAGGAACTGAAGCCTTGTTCGCAGATGTCGGGCATTTCAGCGTTCGATCGATCCAGTTAAGCATGTCAACAGTAACCTATCCAGCTCTAATTTGTGCATATGTAGGCCAAGCCTCATTTCTTCGAAAGCATAATGATCTAGTTTCAGACACATTCTACAAGTCAATTCCCGGAGGTTTGTATTGGCCAATGTTTGTGATGGCAGTTTCAGCATCAATCATAGCAAGCCAAGCAATGATCTCAGGAACTTTCTCTATAATTCAACAATCACTTTCACTTGGATGCTTCCCTAGAGTTAAAGTGGTTCATACATCTGATAAGTATGAAGGCCAAGTTTATATTCCTGAGATCAATTACCTTCTTATGTTGGCTTGTGTTGGTGTCACTTTGGGCTTCAAAAACACTACAAAGATTGGCAATGCATATGGAATAGCAGTAGTTTTTGTGATGACACTCACATCCTCCTTCCTAGTTCTTATAATGGTGATGATTTGGAAAACTCACATCCTTTTCATAATCACTTACATTCTCATCATTGGTAGTGTGGAATTTCTCTATCTGAGTTCAGTCCTTTACAAGTTTGATCAAGGAGGCTATCTCCCTCTGGCTTTTGCTGCTGCTTTGATGACAATAATGTATGTATGGAATAACGTCTTTAGAAAGAAGTACTTTTATGAGCTCAACCACAAAATCTCATCAGAAAAGCTTAATGAGATGGTGAATGCCACCAACTTTAGAAGAATTCCTGGCGTGGCATTGTTCTACTCTGAGCTTGTTCAAGGCATCCCTCCCATCTTTAAGCATTACATCGAGCACGTGCCTGCATTGCACTCCGTGCTCGTCTTTGTCACCATTAAATCACTTCCTGTAAGCAAGGTTCCGACTGATGAACGTTTCCTCTTTCGACAAGTAGAGGCCAAGGAGATCGATGTGTTTCGTTGTGTTGTTCGATACGGGTACACCGACGACGCATGA 2142 41.74 MTCFNKWQRGEVCEERVCNFHTNKKVADSSSSSSQLPNQLYLVYFISFHLSLYFSSSMANRISGVSEVSSAANPDTFSVVAVEEEELPPSLSDSQPQERKLSWKKLRRYDSLDLESRKFEGHHPHHSDAKKWSVILQLAFQSIGIVYGDIGTSPLYVYSSTFPDGIKHNDDVLGVLSLIIYTITMIPVIKYVFIVLRANDNGEGGTFALYSLICRYAKVGLIPNEQIEDRNVSNYQLNLPNEREKRASKIQSTLEKSHFAKLFLLFATMLGTSMVIGDGVLTPCISVLSAVGGIKDATPTMTEGRIVWVSVGILVCLFMVQRFGTDKVGYTFAPIIFIWFGFNAGIGVYNFIKYDPAVVKALNPKYIVAYFKRNNEDAWISLGGVVLAITGTEALFADVGHFSVRSIQLSMSTVTYPALICAYVGQASFLRKHNDLVSDTFYKSIPGGLYWPMFVMAVSASIIASQAMISGTFSIIQQSLSLGCFPRVKVVHTSDKYEGQVYIPEINYLLMLACVGVTLGFKNTTKIGNAYGIAVVFVMTLTSSFLVLIMVMIWKTHILFIITYILIIGSVEFLYLSSVLYKFDQGGYLPLAFAAALMTIMYVWNNVFRKKYFYELNHKISSEKLNEMVNATNFRRIPGVALFYSELVQGIPPIFKHYIEHVPALHSVLVFVTIKSLPVSKVPTDERFLFRQVEAKEIDVFRCVVRYGYTDDA 713
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 78878642 78885630 - Tan0010069.1 Tan04g2201 750605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan04g2201 713 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 118 711 IPR003855 GO:0006813(PANTHER)|GO:0015079(InterPro)|GO:0015079(PANTHER)|GO:0016020(PANTHER)|GO:0016020(InterPro)|GO:0071805(InterPro)
Tan04g2201 713 Pfam K+ potassium transporter integral membrane domain 138 625 IPR053951 -
Tan04g2201 713 NCBIfam potassium uptake protein 138 712 IPR003855 GO:0015079(InterPro)|GO:0016020(InterPro)|GO:0071805(InterPro)
Tan04g2201 713 Pfam K+ potassium transporter C-terminal domain 638 712 IPR053952 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan04g2184 Tan-Chr4:78310197 Tan04g2201 Tan-Chr4:78878642 0.00E+00 dispersed
Tan04g2201 Tan-Chr4:78878642 Tan06g0850 Tan-Chr6:7057270 1.60E-267 dispersed
Tan04g2201 Tan-Chr4:78878642 Tan04g2203 Tan-Chr4:79101987 1.10E-268 proximal
Tan10g1473 Tan-Chr10:21119255 Tan04g2201 Tan-Chr4:78878642 7.70E-210 transposed
Tan04g2201 Tan-Chr4:78878642 Tan06g0848 Tan-Chr6:7015913 4.90E-176 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan04g2201 K03549 - csv:101215797 1088.94