Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan04g2306 | ATGTCGGTGCCTGCGGCTTTCGTCGCTGCAGGTATATTGAAACAGGTCTCTTGTCGGTTTCCAAAGCAGTTCATTTTGTTGTGGTTTGTGATTTCCATCACCAATGCTTACGTTCCCGATATACCAGCAGCACCTTTGGTTGCACCTGCTATCCACGATATGCCTTTGCCTGCCAAGTTGCCTCTTCACCAACACCACCACCGAAAATATATGTCACCGCAGAGTGCGCCAGCAGCTGGACTAGCACCGGCATCTCCTCCTTATTATGGGCCTCTTATCACTTCTGGTCACCCACCCACAAGTTCAAGTTTTTCAAAACCATCGATGAAGAGTGGGTCAGCTCCTCCTGATGGTAGGCTTGAAAACATTGCTCCCATACAGTCCAGTGCTGGTGCTATTCCCTCTGGATTACCTCAGCCACCACTTTCTCCTAATGCAGCAGACTGTTGCAAACCTGACATGGTGCTGAAACGAGGAGGTGGCAATGACTGCCACTGTGTCTATCCCATAAAAATTGATCTCCTCCTCTTGAATGTATCACAGAATCCTAATTGGAAACATTTTCTTGAAGAGTTAGCTTCCGAACTTGGTTTACGAGTCTCTCAGATTGAGCTGATAAACTTTTATGTACTTAGTTTATCAAGATTAAATATCTCAATGGACATTACTCCGCACGCTGGGATCAGCTTCTCTGCAGTTGATGCATCTGCAATAAACTCTTCACTTACAATGCATAAGGTTCATTTAGACCCTACACTGGTTGGTGATTACAATCTTCTTAATATCACCTGGTTTAAGCCTCCGCCTCCTTCTCAAGCTCCTACTGCTTCTGCATCACCTGTAGCCGCTCCAGCATATCATTTTCCAGCCTCAACATCACTGAGTCCTCCTAGTAAAGGACACCATTCCAATCTGACACTTCTTCTTGGTATCGGTGCTGGTTTTCTTTTCGTTGCCATTCTATTTGTGTTGATAATTTGTCTATGCACATCTCATCGTGGGAAGCGGAAGACTGAAGCACCTCCATTAGTAGCTGAAAAACCAAGGGTTGAGGACAAGGTCCTTGGGGTAGGATCTTTCCCTCATCCATCGAGTATGAGATTTCTAACTTATGAGGAGCTTAAAGAAGCAACTAATAACTTTGAAGCTGCAAGCATACTGGGGGAGGGTGGTTTTGGCAGGGTTTTTAAGGGTGTCTTAAGTGATGGCACAGCTGTTGCAATCAAGAGGCTTACAAGTGGAGGGCAACAAGGCGACAAGGAGTTTTTGGTTGAGGTCGAGATGCTTAGCCGGTTGCATCACCGAAATCTCGTTAAACTTGTTGGCTACTACAGTAATCGCGACTCTTCACAAAACCTGCTATGCTATGAACTTGTTCCAAATGGAAGCTTGGAGGCCTGGCTCCATGGTCCTCTAGGTGTTAATTGTCCTTTGGATTGGGACACCAGAATGAAGATTGCACTGGATGCCGCTCGAGGACTTGCTTACCTTCATGAAGACTCACAGCCATGTGTTATCCACAGAGACTTTAAGGCGTCAAATATATTGCTTGAGAACAACTTCCATGCCAAAGTTGCTGACTTTGGTCTTGCTAAACAAGCTCCGGAAGGCAGAGCTAATTACCTTTCTACTCGGGTGATGGGCACATTTGGGTATGTCGCTCCCGAGTATGCAATGACTGGTCATTTACTCGTTAAAAGTGATGTTTATAGCTATGGAGTTGTTCTTCTCGAGTTGCTCACTGGAAGGAAACCTGTAGATATGTCACAACCATCAGGACAGGAAAACCTGGTCACATGGGCTAGGCCGATTTTGAGAGATAAGGATCGGTTGGAAGAACTTGCTGATCCACGACTTGGAGGAAAGTATCCGAACGAAGATTTCGTGCGGGTGTGTACCATTGCTGCAGCCTGCGTTGCTCCTGAGGCTGGCCAACGTCCAACTATGGGCGAAGTTGTACAGTCTCTTAAAATGGTGCAACGCGTTACAGAGTACCAAGACTCCATGGTACCATCCACCAACAATCGAACCAATCTTAGACAGTCCTCCACGACATTCGAGTCCGATGGATCCTCTTCAATGTTCTCTTCTGGTCCTTATTCGGGTTTAAGCGCTTTTGACAATGACAATGTATCTCGGACAGCAATTTTCTCCGAAGATCTTCACGAGGGACGATGA | 2178 | 46.1 | MSVPAAFVAAGILKQVSCRFPKQFILLWFVISITNAYVPDIPAAPLVAPAIHDMPLPAKLPLHQHHHRKYMSPQSAPAAGLAPASPPYYGPLITSGHPPTSSSFSKPSMKSGSAPPDGRLENIAPIQSSAGAIPSGLPQPPLSPNAADCCKPDMVLKRGGGNDCHCVYPIKIDLLLLNVSQNPNWKHFLEELASELGLRVSQIELINFYVLSLSRLNISMDITPHAGISFSAVDASAINSSLTMHKVHLDPTLVGDYNLLNITWFKPPPPSQAPTASASPVAAPAYHFPASTSLSPPSKGHHSNLTLLLGIGAGFLFVAILFVLIICLCTSHRGKRKTEAPPLVAEKPRVEDKVLGVGSFPHPSSMRFLTYEELKEATNNFEAASILGEGGFGRVFKGVLSDGTAVAIKRLTSGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYYSNRDSSQNLLCYELVPNGSLEAWLHGPLGVNCPLDWDTRMKIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRANYLSTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPSGQENLVTWARPILRDKDRLEELADPRLGGKYPNEDFVRVCTIAAACVAPEAGQRPTMGEVVQSLKMVQRVTEYQDSMVPSTNNRTNLRQSSTTFESDGSSSMFSSGPYSGLSAFDNDNVSRTAIFSEDLHEGR | 725 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 81224418 | 81230139 | - | Tan0002023.1 | Tan04g2306 | 750710 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan04g2306 | 725 | FunFam | Receptor-like serine/threonine-protein kinase ALE2 | 361 | 458 | - | - | |
Tan04g2306 | 725 | MobiDBLite | consensus disorder prediction | 97 | 120 | - | - | |
Tan04g2306 | 725 | ProSiteProfiles | Protein kinase domain profile. | 381 | 659 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Tan04g2306 | 725 | SUPERFAMILY | Protein kinase-like (PK-like) | 360 | 658 | IPR011009 | - | |
Tan04g2306 | 725 | Pfam | Protein tyrosine and serine/threonine kinase | 384 | 656 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Tan04g2306 | 725 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 505 | 517 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Tan04g2306 | 725 | ProSitePatterns | Protein kinases ATP-binding region signature. | 387 | 409 | IPR017441 | GO:0005524(InterPro) | |
Tan04g2306 | 725 | MobiDBLite | consensus disorder prediction | 670 | 707 | - | - | |
Tan04g2306 | 725 | CDD | STKc_IRAK | 387 | 657 | - | - | |
Tan04g2306 | 725 | Gene3D | Phosphorylase Kinase; domain 1 | 362 | 458 | - | - | |
Tan04g2306 | 725 | Gene3D | Transferase(Phosphotransferase) domain 1 | 459 | 681 | - | - | |
Tan04g2306 | 725 | PANTHER | OS01G0750732 PROTEIN | 148 | 698 | IPR050885 | - | |
Tan04g2306 | 725 | FunFam | Receptor-like serine/threonine-protein kinase ALE2 | 459 | 676 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan04g2306 | Tan-Chr4:81224418 | Tan04g2309 | Tan-Chr4:81224418 | 0.00E+00 | dispersed | |
Tan05g0237 | Tan-Chr5:1803175 | Tan04g2306 | Tan-Chr4:81224418 | 9.30E-65 | dispersed | |
Tan10g1250 | Tan-Chr10:14025991 | Tan04g2306 | Tan-Chr4:81224418 | 2.80E-75 | dispersed | |
Tan04g2306 | Tan-Chr4:81224418 | Tan04g2307 | Tan-Chr4:81224418 | 0.00E+00 | tandem |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
67484 | PF00069 | Pkinase | 5.90E-44 | CL0016 | Tan | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan04g2306 | - | - | - | 0.0 |