Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan04g2306 ATGTCGGTGCCTGCGGCTTTCGTCGCTGCAGGTATATTGAAACAGGTCTCTTGTCGGTTTCCAAAGCAGTTCATTTTGTTGTGGTTTGTGATTTCCATCACCAATGCTTACGTTCCCGATATACCAGCAGCACCTTTGGTTGCACCTGCTATCCACGATATGCCTTTGCCTGCCAAGTTGCCTCTTCACCAACACCACCACCGAAAATATATGTCACCGCAGAGTGCGCCAGCAGCTGGACTAGCACCGGCATCTCCTCCTTATTATGGGCCTCTTATCACTTCTGGTCACCCACCCACAAGTTCAAGTTTTTCAAAACCATCGATGAAGAGTGGGTCAGCTCCTCCTGATGGTAGGCTTGAAAACATTGCTCCCATACAGTCCAGTGCTGGTGCTATTCCCTCTGGATTACCTCAGCCACCACTTTCTCCTAATGCAGCAGACTGTTGCAAACCTGACATGGTGCTGAAACGAGGAGGTGGCAATGACTGCCACTGTGTCTATCCCATAAAAATTGATCTCCTCCTCTTGAATGTATCACAGAATCCTAATTGGAAACATTTTCTTGAAGAGTTAGCTTCCGAACTTGGTTTACGAGTCTCTCAGATTGAGCTGATAAACTTTTATGTACTTAGTTTATCAAGATTAAATATCTCAATGGACATTACTCCGCACGCTGGGATCAGCTTCTCTGCAGTTGATGCATCTGCAATAAACTCTTCACTTACAATGCATAAGGTTCATTTAGACCCTACACTGGTTGGTGATTACAATCTTCTTAATATCACCTGGTTTAAGCCTCCGCCTCCTTCTCAAGCTCCTACTGCTTCTGCATCACCTGTAGCCGCTCCAGCATATCATTTTCCAGCCTCAACATCACTGAGTCCTCCTAGTAAAGGACACCATTCCAATCTGACACTTCTTCTTGGTATCGGTGCTGGTTTTCTTTTCGTTGCCATTCTATTTGTGTTGATAATTTGTCTATGCACATCTCATCGTGGGAAGCGGAAGACTGAAGCACCTCCATTAGTAGCTGAAAAACCAAGGGTTGAGGACAAGGTCCTTGGGGTAGGATCTTTCCCTCATCCATCGAGTATGAGATTTCTAACTTATGAGGAGCTTAAAGAAGCAACTAATAACTTTGAAGCTGCAAGCATACTGGGGGAGGGTGGTTTTGGCAGGGTTTTTAAGGGTGTCTTAAGTGATGGCACAGCTGTTGCAATCAAGAGGCTTACAAGTGGAGGGCAACAAGGCGACAAGGAGTTTTTGGTTGAGGTCGAGATGCTTAGCCGGTTGCATCACCGAAATCTCGTTAAACTTGTTGGCTACTACAGTAATCGCGACTCTTCACAAAACCTGCTATGCTATGAACTTGTTCCAAATGGAAGCTTGGAGGCCTGGCTCCATGGTCCTCTAGGTGTTAATTGTCCTTTGGATTGGGACACCAGAATGAAGATTGCACTGGATGCCGCTCGAGGACTTGCTTACCTTCATGAAGACTCACAGCCATGTGTTATCCACAGAGACTTTAAGGCGTCAAATATATTGCTTGAGAACAACTTCCATGCCAAAGTTGCTGACTTTGGTCTTGCTAAACAAGCTCCGGAAGGCAGAGCTAATTACCTTTCTACTCGGGTGATGGGCACATTTGGGTATGTCGCTCCCGAGTATGCAATGACTGGTCATTTACTCGTTAAAAGTGATGTTTATAGCTATGGAGTTGTTCTTCTCGAGTTGCTCACTGGAAGGAAACCTGTAGATATGTCACAACCATCAGGACAGGAAAACCTGGTCACATGGGCTAGGCCGATTTTGAGAGATAAGGATCGGTTGGAAGAACTTGCTGATCCACGACTTGGAGGAAAGTATCCGAACGAAGATTTCGTGCGGGTGTGTACCATTGCTGCAGCCTGCGTTGCTCCTGAGGCTGGCCAACGTCCAACTATGGGCGAAGTTGTACAGTCTCTTAAAATGGTGCAACGCGTTACAGAGTACCAAGACTCCATGGTACCATCCACCAACAATCGAACCAATCTTAGACAGTCCTCCACGACATTCGAGTCCGATGGATCCTCTTCAATGTTCTCTTCTGGTCCTTATTCGGGTTTAAGCGCTTTTGACAATGACAATGTATCTCGGACAGCAATTTTCTCCGAAGATCTTCACGAGGGACGATGA 2178 46.1 MSVPAAFVAAGILKQVSCRFPKQFILLWFVISITNAYVPDIPAAPLVAPAIHDMPLPAKLPLHQHHHRKYMSPQSAPAAGLAPASPPYYGPLITSGHPPTSSSFSKPSMKSGSAPPDGRLENIAPIQSSAGAIPSGLPQPPLSPNAADCCKPDMVLKRGGGNDCHCVYPIKIDLLLLNVSQNPNWKHFLEELASELGLRVSQIELINFYVLSLSRLNISMDITPHAGISFSAVDASAINSSLTMHKVHLDPTLVGDYNLLNITWFKPPPPSQAPTASASPVAAPAYHFPASTSLSPPSKGHHSNLTLLLGIGAGFLFVAILFVLIICLCTSHRGKRKTEAPPLVAEKPRVEDKVLGVGSFPHPSSMRFLTYEELKEATNNFEAASILGEGGFGRVFKGVLSDGTAVAIKRLTSGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYYSNRDSSQNLLCYELVPNGSLEAWLHGPLGVNCPLDWDTRMKIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRANYLSTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPSGQENLVTWARPILRDKDRLEELADPRLGGKYPNEDFVRVCTIAAACVAPEAGQRPTMGEVVQSLKMVQRVTEYQDSMVPSTNNRTNLRQSSTTFESDGSSSMFSSGPYSGLSAFDNDNVSRTAIFSEDLHEGR 725
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 81224418 81230139 - Tan0002023.1 Tan04g2306 750710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan04g2306 725 FunFam Receptor-like serine/threonine-protein kinase ALE2 361 458 - -
Tan04g2306 725 MobiDBLite consensus disorder prediction 97 120 - -
Tan04g2306 725 ProSiteProfiles Protein kinase domain profile. 381 659 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan04g2306 725 SUPERFAMILY Protein kinase-like (PK-like) 360 658 IPR011009 -
Tan04g2306 725 Pfam Protein tyrosine and serine/threonine kinase 384 656 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan04g2306 725 ProSitePatterns Serine/Threonine protein kinases active-site signature. 505 517 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan04g2306 725 ProSitePatterns Protein kinases ATP-binding region signature. 387 409 IPR017441 GO:0005524(InterPro)
Tan04g2306 725 MobiDBLite consensus disorder prediction 670 707 - -
Tan04g2306 725 CDD STKc_IRAK 387 657 - -
Tan04g2306 725 Gene3D Phosphorylase Kinase; domain 1 362 458 - -
Tan04g2306 725 Gene3D Transferase(Phosphotransferase) domain 1 459 681 - -
Tan04g2306 725 PANTHER OS01G0750732 PROTEIN 148 698 IPR050885 -
Tan04g2306 725 FunFam Receptor-like serine/threonine-protein kinase ALE2 459 676 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan04g2306 Tan-Chr4:81224418 Tan04g2309 Tan-Chr4:81224418 0.00E+00 dispersed
Tan05g0237 Tan-Chr5:1803175 Tan04g2306 Tan-Chr4:81224418 9.30E-65 dispersed
Tan10g1250 Tan-Chr10:14025991 Tan04g2306 Tan-Chr4:81224418 2.80E-75 dispersed
Tan04g2306 Tan-Chr4:81224418 Tan04g2307 Tan-Chr4:81224418 0.00E+00 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67484 PF00069 Pkinase 5.90E-44 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan04g2306 - - - 0.0